Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1473 |
Symbol | |
ID | 8543855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1995633 |
End bp | 1996490 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646386184 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003265919 |
Protein GI | 262194710 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAACA AGCGGCAGCT TTCGGGCCTA CAACGGACCA TCTATGGGGA TTCGACCAAC CTCGGTGTCG TCGACGCCAT TCACCGTGGC GGGTGCCACC GCGTGAACGA CACCGCGACG CTCATGGAGC TGCTGCGCCG GGGCTCGCGC CTCGACAGCG ACAACCCGAC GCCGCTGTAT CAGCGCCTGC AGCAGGGGAT TCGCCTGGCC GTGCGCGATG GCGCCGTGGC TGAGGAGCAG GCCCTGCCCA GCGAGCGCGA GCTGGCCACC GGCCTCGGCA TCTCGCGCGT GACCGTGCGC AAGGCGATCG CCGGGCTGGT CGCGGAGAAT CTGCTGGTGC AGCGCCAGGG CGCGGGCACC TTCGTGTCGC CGCGCGTGGA GCAGCCGCTG TCGCAGCTCA CCGGCTTCAC CGAGGACATG CACGCGCGCG GTCGCACGCC CGGCCTCGAG TGGCTCGATC GCTCGAGCGG CACGGCGACG CCGCAGGAGG CCAACGCGCT GGCGCTGGCC GCGGGCGCGC CGGTGTCGCG CTTCTACCGC ATCCGCACGG CCGACGACAA ACCCATGTGC CTCGAGCACG CGACCGTGCC GGCCGCGGTC CTGCCCGACC CGCAGGCGGT CGCCAACTCG CTGTACGCGG CGCTCGAGCG CGCCGGTCTG CGGCCCGTGC GCGCGACCCA GCGCCTGCGG GCCGCGCTCT TCAGCATCGA ACAGGCGCAT CTGCTCGGCG TGCCGCCCGG CTCGGCCTGC CTGTACATCG AACGCCGCTC GTATCTGGCG GACGGTCGTC CGATTGAATT CGTGCGCTCC CATTACCGGG GCGATTCGTA TGATTTCGTC GCTGAATTAG TCATCTGA
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Protein sequence | MINKRQLSGL QRTIYGDSTN LGVVDAIHRG GCHRVNDTAT LMELLRRGSR LDSDNPTPLY QRLQQGIRLA VRDGAVAEEQ ALPSERELAT GLGISRVTVR KAIAGLVAEN LLVQRQGAGT FVSPRVEQPL SQLTGFTEDM HARGRTPGLE WLDRSSGTAT PQEANALALA AGAPVSRFYR IRTADDKPMC LEHATVPAAV LPDPQAVANS LYAALERAGL RPVRATQRLR AALFSIEQAH LLGVPPGSAC LYIERRSYLA DGRPIEFVRS HYRGDSYDFV AELVI
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