Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1472 |
Symbol | |
ID | 8543854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1993802 |
End bp | 1995424 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646386183 |
Product | Chitinase |
Protein accession | YP_003265918 |
Protein GI | 262194709 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAATACG TACTCGCGTC ATTAGTATTC GCTGCCGCCG GATTGCTCGC CACCCCGGCC CACGCCGAGG ATTGCAGCAA TCTCGCGGTG TGGAACAGCG TCACCGCCTA CGTGGGCGGC GACCAGGTCC AGCACAACGG CAACGCGTAC ATCGCCAACT GGTGGACGCA GAACCAGGAT CCCGAGGCCT TCTCGGGCGA GTGGCAGGAG TGGAGCTTGC TCGGCGCCTG CGACGATGAC GGCGGCCCCG GCGACCCCGG CGGCGGTCCC AGCGCCAGCG TCAACGGCCC GTACTACGGC AGCGTGGGCA CAGCCATCAG CTTCTCCAGC GCGGGCAGCT CGGGCGCCAG CAGCCTGCAG TGGAACTTCG GCGACGGCGG CAGCAGCACG GCCGCCAATC CCCAGCACAC CTACGCCAGC GCGGGTAGCT ACGTGGTGAC CCTGAGCGTC ACCGACGCCA ACGGCAACAC CGACAGCGCC AGCACCACGG CCAACGTGAG CAGCGGCGAC ACCGGCAACG GCGGTCAGAA GGTGATCGGC TATTTCGCCC AGTGGGGCGT CTACGGCCGC AACTACCACG TCAAGAACAT CCACACCAGC GGCTCCGCCT CCAAGCTCAC GCACATCGTC TACGCCTTTG GCAACGTCAC CAACGGCCGC TGCGTGATCG GCGACTCCTA CGCCGACTAC GACAAGTTCT ACAGCGCGGC CGACAGCGTC GACGGCGTCG CCGATAGCTG GGACGCGGGC GCCCTGCGCG GCAGCTTCGG CCAGCTCCGC CGCCTCAAGC AGATGTATCC GCACATCAAG ATCGTCTGGT CCTTCGGCGG CTGGACCTGG TCGGGTGGCT TCGGTGAGGC CGCCGCCAAC CCGCAGGCCT TCGCCGAGTC GTGCTACCAG CTCATCCACG ATCCCCGCTG GGACGGCGTC TTCGACGGCA TCGACATCGA CTGGGAGTAC CCCAACTCCT GCGGTCTGAG CTGCGACAAC AGCGGCTACG ACGCCTACCC CACCCTCATG GCCGCGCTGC GCGCGCGCTT TGGCAACGAG CTGGTCACCG CCGCCATCGG CGCTGGCGAG TCCAAGCTCA ACGCCGCCAA CTACGGCGCT GCGGCCCAGT ACCTCGACTT CTACATGCTG ATGACCTACG ACTTCTTCGG CGCCTTCGCG GCCCAGGGAC CGACGGCCCC GCACTCGGCC CTGCACGACT TCGCCAGCAT CCCCACGCCC AACTTCTACA GCGACTACGC CGTGCAGCTC CTCAAGAGCA AGGGCGTGCC GGCCGACAAG ATCCTGCTCG GCATCGGCTT CTACGGTCGC GGCTGGACCG GCGTCACCCA GAGCGCGCCC GGCGGCTCGG CGACCGGCGC GGCCCCCGGC ACCTACGAGC AGGGCATCGA GGACTACAAA GTGCTCAAGA ACACCTGTCC GGCCACGGCC ACCTTCGCCG GCACCGCGTA CGCGCACTGC GGCAACGACT GGTGGAGCTA CGACACCCCG GGCACCATCA CCACCAAGAT GAACTACGCC CGCCAGCAGG GACTCGGCGG CGCGTTCTTC TGGGAGCTGA GCGGAGACAC CAGCAACGGT GAGCTGGTGA CCGCGATCAG CAACGGGCTC TGA
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Protein sequence | MKYVLASLVF AAAGLLATPA HAEDCSNLAV WNSVTAYVGG DQVQHNGNAY IANWWTQNQD PEAFSGEWQE WSLLGACDDD GGPGDPGGGP SASVNGPYYG SVGTAISFSS AGSSGASSLQ WNFGDGGSST AANPQHTYAS AGSYVVTLSV TDANGNTDSA STTANVSSGD TGNGGQKVIG YFAQWGVYGR NYHVKNIHTS GSASKLTHIV YAFGNVTNGR CVIGDSYADY DKFYSAADSV DGVADSWDAG ALRGSFGQLR RLKQMYPHIK IVWSFGGWTW SGGFGEAAAN PQAFAESCYQ LIHDPRWDGV FDGIDIDWEY PNSCGLSCDN SGYDAYPTLM AALRARFGNE LVTAAIGAGE SKLNAANYGA AAQYLDFYML MTYDFFGAFA AQGPTAPHSA LHDFASIPTP NFYSDYAVQL LKSKGVPADK ILLGIGFYGR GWTGVTQSAP GGSATGAAPG TYEQGIEDYK VLKNTCPATA TFAGTAYAHC GNDWWSYDTP GTITTKMNYA RQQGLGGAFF WELSGDTSNG ELVTAISNGL
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