Gene Hoch_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1470 
Symbol 
ID8543852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1992065 
End bp1992610 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID646386181 
ProductWD40 repeat, subgroup 
Protein accessionYP_003265916 
Protein GI262194707 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGCTG CGCGCTTCAG CCCGGACGGC GAATACGTGC TCGCTACCGG GTTCGCCCCG 
AGGCTGCGGG TCAGGAGAGC GGATGAAGAG GGCGCGACCG TGGCGGTGTG CGAGCTCGGC
GCCGGATCGT ATGCGGTAGC CTTCGATCCG GCTGGCACGC GTCTGGCGGC CGGGAATACG
AACATAGAGG TGTGGCCGGC CGACTGCCGC GGTTCGCCTG TGGTGCTGCG CGGTCACACG
GACGCGATCC GCTCGCTCGA ATTCAGCCCC GACGGCGCGC GGCTGGTCTC GGCGTCCGAC
GACAAAACCG TTCGGGTGTG GCAGCTCGGC GGCAGCGCGG CGCCCGTGGT CCTGCGCGGC
CATTCGGCCC TGGTCTGGGC GGCCAACTTC AGGCCCGATG GGACGCGCGT GGTCTCGGCG
TCCGAAGACA AGACCATCCG GGTGTGGAAT GCCGACGGCA GCGGCGTGCC GCTGGTGCTG
CGCGGACATG AAGACGGGGT CAGGTCAGTC GAATTCAGCC CCGACGGCCA GCGCATCGTG
TTATGA
 
Protein sequence
MYAARFSPDG EYVLATGFAP RLRVRRADEE GATVAVCELG AGSYAVAFDP AGTRLAAGNT 
NIEVWPADCR GSPVVLRGHT DAIRSLEFSP DGARLVSASD DKTVRVWQLG GSAAPVVLRG
HSALVWAANF RPDGTRVVSA SEDKTIRVWN ADGSGVPLVL RGHEDGVRSV EFSPDGQRIV
L