Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1468 |
Symbol | |
ID | 8543850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 1990501 |
End bp | 1991412 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646386179 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003265914 |
Protein GI | 262194705 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.845571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTGCA AGCGCGGCCC GCGCGTGTAC TGTGCGCGCG CCGCGACCGG CAGCCCCATG CACGCACCCG ACATCATCCG ATTACTCGCG CTGGCGGCCA TCTGGGGCGG CTCCTTCATT TTCATGAAGG TGCTCGCCCC GGCCATCGGC GCCGTGCGCA CCGCGGACCT GCGAGTGTTG ATCGCGGGCA TCCTGCTCGT GATCTACCTG CGCGCGCGCG GTCGCGATCT CGAGTTTCGG CGCTTCTGGC GGCAGTATCT GGTCATCGGC GTCGTCAACT CGGGCATCCC GTTCCTGTGT TACACGTACG CGGCGCTGCA TATCCCGGCC TCGTATTCGG TGATCCTGAA CGCGACCGCG CCCGCCTTTG GCGCCATCTT CGCCGCCATC TGGCTCGCCG ATCGCTTCAC CATCTGGCGG TTCCTGGGTC TGCTGCTGGG CGCGTGCGGT GTCGCGCTCA TGAGCTGGCG CGGCCCGGTT CCCTTCACCT TCGAGGTCAC CGCCGCGATC GCCGCGTGTC TGGTGGCCAC GACCTGCTAC GGGCTGGCGG GCGTGTACAT GAAGAAGCGC GCGTCGGGGG CGGCCGCGGC CTCGATCGCC GCGTGCAGTC AGCTCGTGGC CGGCCTGTTG CTGTTTCCGG CGACTCTGTT CACCCCGCTG GAGACGCCGC TGACACCGTT CCTGGTGGCC AACATCCTCG CGCTTGCGGT CGTTTGCAGC GCGCTGGCGT ACCTGCTGTA TTACCGGCTG ATCGTCGATA TCGGCCCGGC CAAGGCCTTG ACCGTCACCT TTTTGATGCC GGTCTTCGGC ATGCTGTGGG GATTTCTGTT CCTCGACGAG GAGATCACCC TGGCCATGTT GGCCGGCGTC GGCCTGATCC TCTCCGGCAC CTTCGTGGTC GCCCGGCGCT AG
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Protein sequence | MLCKRGPRVY CARAATGSPM HAPDIIRLLA LAAIWGGSFI FMKVLAPAIG AVRTADLRVL IAGILLVIYL RARGRDLEFR RFWRQYLVIG VVNSGIPFLC YTYAALHIPA SYSVILNATA PAFGAIFAAI WLADRFTIWR FLGLLLGACG VALMSWRGPV PFTFEVTAAI AACLVATTCY GLAGVYMKKR ASGAAAASIA ACSQLVAGLL LFPATLFTPL ETPLTPFLVA NILALAVVCS ALAYLLYYRL IVDIGPAKAL TVTFLMPVFG MLWGFLFLDE EITLAMLAGV GLILSGTFVV ARR
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