| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1466 |
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| Symbol | |
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| ID | 8543848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1986736 |
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| End bp | 1989864 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646386177 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003265912 |
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| Protein GI | 262194703 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.198687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGC GACTCATCGA CCTCTGCCTG CGTTTTCGTC CGATCGTCCT GCTGGCCACC
GCGCTGCTGA TCGCGCTCGG TCTGGTCAGT CTGTCGCGGC TGCCACTCGA CGCGTTTCCG
GACACCACGC CGGTGCAGGT GCAGGTCAAC ACCGCGGCGC CCGCGCTGTC GCCGCTCGAG
GTGGAGCGCC AGATCACCTT CGTCATCGAG CAGGCGATCG CGGGCCTACC CGGCCTCAGC
GAGGTGCGCT CGATCTCCAA ATTCGGCTTC TCGCAGGTGG TCGCGATCTT CGACGACGAC
ACCGACATCT ACCTGGCGCG CCAGGTCGTG AGCGAGCGCC TGGCCAGCGC GACCCTGCCC
GAGGGCGTCG CCCGGCCCGC GCTCGGGCCG GTCTCCACCG GGCTCGGCGA GGTGTTTCAG
TACGTGCTGC ACAGCGACAC GCTCTCGGCC CAGGAGCTGC GTACTTTGCA TCACTGGGTG
ATCCGGCCGC AGATGGTGCA GGTCCCCGGC GTCGCCGAGA TCAACACCTG GGGCGGCTAC
GAAAAACAGG TGCACGTGGT CGTCGAGCCC CGGCTGCTGG TCAAGCACGC GCTGACCCTC
GACGACGTCG CCCGGGCCTT GCGCCACGGC AACCGCAACG CCGGCGGCGG CGTTCTCGAC
CAGGCGGGCG AGGCGCTGCT CATCCAGGGC CAGGGCTTGG TGACGAGCAT CGCCGACCTC
GAGGCCATGG TGCTGGCGAA TGTGGACGGC ACACCCATCC GGCTGAGCGA TGTCGCCGAG
GTGCGCGAGG GCCACGAGAT CCGCCGCGGC GCGGTTACCT ATCAGGGTCA GGGCGAGGCC
GTGCTCGGCC TCGGCTTCAT GCTCATGGGC GAGAACAGCC GCGCGCTCAC CCAGCGGCTC
GAGGCGCGGC TCGCCGAGGT GCGGCGCAGT CTGCCCGAGG GCGCCGAGCT GAGCGAAGTC
TACAGCCGCA CCGAGCTGGT CGACGAGGTG TTGCGCACGG TCCGCAACAA CCTGGTCGAG
GGCGCGTTGC TGGTCATCGC GGTGCTGTTC GCGTTCCTGG GCAACATCCG CGCCGGCGTG
ATCGTGGCGC TGGCGATCCC GCTGTCGATG CTGTTCGCGT TCAACGCCAT GCTGCGCTTC
GGCATCGCCG GCAGTCTGAT GAGTCTGGGC GCGATCGATT TCGGACTGGT GGTCGACAGC
TCGGTGATCA TGGTCGAGAA CGCGGCCCGC CGCCTCGGCG AGGACCGGTC GCCGCGCAGC
GTGCGCGAGG TCGTGCGCGA CGCCGCCGTG GAGGTGCGCC GCCCGACCCT GTTCGGCGAG
CTGATCATCG CCATCGTGTA CCTGCCGGTG CTGGCCCTCG AGGGCGTGGA GGGCAAGATG
TTTCGGCCCA TGGCGCTCAC CGTGATCTTT GCCCTGGCCG GCTCGATGCT GCTGTCGATG
ACGCTCATGC CCGTGCTCGC CAGCTACGTG CTCGAGAAAG GCCAGGGCAG CGGCGAAAAT
CGCCCGGTCC GCTGGCTCAG GCGCCGCTAT CGCCCGGTCC TGGGCTGGGC GCTGGAAAAT
CGGACGATCG TCCTGATTCT AGCCGGCGTC GTGGTCGCCA ACGCGGCGTT CCTGGCCTCG
CGGCTCGGCT CCGAGTTCGC GCCCCGGCTG CGCGAGCAGG CCATCGTCAT CAACACCGTG
CGCATGGCGG GCGTGTCGCT CGACGAGTCG GTGCGCTACG GCACCCAGAT CGAGCGCCGT
CTGCTCGAGC GCTATCCCGA CGAGATCGAG CACGTGTGGA CGCGCACGGG CACCGCCGAG
GTGGCCACCG ATCCCATGGG ACTCGAGGTC TCCGACGTGT TTCTCACGCT CGCGCCGCGC
GCGGCGTGGC AGCGCGCCCG CACCCAGGAT GAGCTGGTCG AGGCCATGCG CGCGACCCTC
GAGGGCATGC CCGGCATGCG CAGCGTGTTC ACCCAGCCCA TCGAGATGCG GGCCAACGAG
ATGATCGCCG GCATTCGCTC GGACGTGGGC ATCAAGCTCT TTGGCGATGA CTTCGAGCGA
CTGCGCACCG CGGCCGACGA CATCCGGCGC GCGCTCGAGC GCATCCCGGG CGCGGCCGAT
GTCACCGTAG AGCAGCTCAC CGGCCAGGCC ATGTTGACCA TCGAGGTCGA TCGCGAGGCC
GCCGGGCGCT ATGGCATTCC GGTCGGCGAG GTCCTCGAGC TCGTCGAGTC GCTGGGCACG
CGCAAACTCG GCGAGGTGGT CGAGGGTCAG CGCCGCTTCG ACCTGGTGCT GCGGCTGGCC
GATGAGGCGC GCAGCTCGGC CGAGCGCATG GGCCAGGTGC TGATCCGCAC CGAGGCCGGC
GCGCAGGTGC CGCTCGCGTC GGTTGCCCGG GTCGCCATCG TCGAGGGGCC GTCGTCGATC
CAGCGCGAGT GGGCCAAGCG CCGGGTGGTC ATTCAGGCCA ACGTGCGCGA GCGTGACATC
GGCTCGTTCG TCGCTGAAGT CCGCCAGGCG CTGCGCGATA TCGGCTTGCC GGAGGGCTAC
TACACCAAGC TCGGCGGCCA GTTCGAGAAT CTCGAGCGCG CCCAGGCGCG GCTGATGATC
GTCGTGCCCA TCGCGCTCTT GCTCATCTTC TCGTTGCTCT ATCTTACCTA CGGACGCGTG
TCCGACGCGC TGCGTGTGTT CACGGGCGTG CCCTTTGGCG CAGTCGGCGG GATCGTGTTG
CTGTGGGCGC GCGATATGCC GTTTTCGATC TCGGCCGGTG TCGGCTTCAT CGCGCTCTCG
GGTGTGGCCG TGCTGGGAGA TATGGTGCTG GTGTCGTATG TCATGCAGCT CCGCGCGCGC
GGACGCGCCC CGCTCGAGGC CATTCGCGAG GCCGCCGAGA CCCGCCTGCG GCCGGTGCTG
ATGACCGCCC TGGTCGCGGC CTTGGGCTTT TTGCCCATGG CGGTGAACAC CGGCGTCGGC
GCCGAGGTGC AGCGTCCGCT GGCCACCGTG GTGGTCGGCG GTATGGTCAC GGCCACCATG
GCGACCCTGT TCGTGCTGCC AGTGCTGTAC GCGGTCTTTG GCGTACGGCG GTCCGAGGAT
ACGCGGGTTG GAGCCGCGTT TGAAGGCGAC GATCCGGTGC TGCCGTCCGA TCTCGGTGAG
CGCAGATGA
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| Protein sequence | MLTRLIDLCL RFRPIVLLAT ALLIALGLVS LSRLPLDAFP DTTPVQVQVN TAAPALSPLE
VERQITFVIE QAIAGLPGLS EVRSISKFGF SQVVAIFDDD TDIYLARQVV SERLASATLP
EGVARPALGP VSTGLGEVFQ YVLHSDTLSA QELRTLHHWV IRPQMVQVPG VAEINTWGGY
EKQVHVVVEP RLLVKHALTL DDVARALRHG NRNAGGGVLD QAGEALLIQG QGLVTSIADL
EAMVLANVDG TPIRLSDVAE VREGHEIRRG AVTYQGQGEA VLGLGFMLMG ENSRALTQRL
EARLAEVRRS LPEGAELSEV YSRTELVDEV LRTVRNNLVE GALLVIAVLF AFLGNIRAGV
IVALAIPLSM LFAFNAMLRF GIAGSLMSLG AIDFGLVVDS SVIMVENAAR RLGEDRSPRS
VREVVRDAAV EVRRPTLFGE LIIAIVYLPV LALEGVEGKM FRPMALTVIF ALAGSMLLSM
TLMPVLASYV LEKGQGSGEN RPVRWLRRRY RPVLGWALEN RTIVLILAGV VVANAAFLAS
RLGSEFAPRL REQAIVINTV RMAGVSLDES VRYGTQIERR LLERYPDEIE HVWTRTGTAE
VATDPMGLEV SDVFLTLAPR AAWQRARTQD ELVEAMRATL EGMPGMRSVF TQPIEMRANE
MIAGIRSDVG IKLFGDDFER LRTAADDIRR ALERIPGAAD VTVEQLTGQA MLTIEVDREA
AGRYGIPVGE VLELVESLGT RKLGEVVEGQ RRFDLVLRLA DEARSSAERM GQVLIRTEAG
AQVPLASVAR VAIVEGPSSI QREWAKRRVV IQANVRERDI GSFVAEVRQA LRDIGLPEGY
YTKLGGQFEN LERAQARLMI VVPIALLLIF SLLYLTYGRV SDALRVFTGV PFGAVGGIVL
LWARDMPFSI SAGVGFIALS GVAVLGDMVL VSYVMQLRAR GRAPLEAIRE AAETRLRPVL
MTALVAALGF LPMAVNTGVG AEVQRPLATV VVGGMVTATM ATLFVLPVLY AVFGVRRSED
TRVGAAFEGD DPVLPSDLGE RR
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