| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1465 |
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| Symbol | |
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| ID | 8543847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1985177 |
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| End bp | 1986736 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646386176 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003265911 |
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| Protein GI | 262194702 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.817622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGCT GGCGCATATT CGTCGCGCTG TCCGCCTTAC TCGCCTCGCT GCTCGCGTCG
GCGTGCGGCG AGCGCGGCGC CGATCGCTCT GCCCCCCAGC CGGCTGCCCC CCAGCTGGCC
GCGGCCGCGG CCGAGGCGTG CGAGCACGGC CTGCCGCCGG CGCTGTGCAC CAAGTGCAAC
CCGGCGCTGG TGGCGGTGTT TCAGTCCAAG GGTGATTGGT GCGACGAGCA CGGCTTCCCC
GAGTCCTTCT GTCCCATCTG CAACCCGGAC GCGCTCATCC CCGACGTGGG CGAGACCCCG
GCCGCGATCG CGGATTGGTG CGGCGGACAC GGCTTGCCCG AGTCCAAATG TACGAAATGC
AATCCCGAGC TCATTCCTCA GTTCCAGGCC GCCGGCGACT GGTGCGAGGA ACACGGCTAT
CCCGAGTCGG CGTGTCCGGT GTGCAATCCT CAGGAGCCAC CGAGCGGCGC TGAGCGCGCC
GCTCTCGAAG CGCGCGTGGT GCGCTTTCGC GCGCCCGACA TCGAATCTTC GGCCGGCATC
CAGAGCGAGC CCGCGCAGCG CGCGCAGGTC GCGGCCGCGA TCGAGTGCAG CGCGCGCATC
GCGTTCGACA GCGACCGGGT GGCCGATATC CGCGCCATCG TTCCCGGCAT CGTGCGCCGC
GTGCGCGTCG AACTCGGCGC TGAGGTCGCG CGCGGGGCGC CGCTCTTCGA GCTGGAGAGC
ACGCGCGTCG GCGAGATCCA GGGCACCCTC CAAGCCGCGC GCGAGCGCGT GCGTGCGGCC
CAGGCCGAGG TCGAGCGCCA GCGCGCGCTG CGCGCCAGCG AGATCGCATC GGCGCGTCAG
CTCGAGCTCG CCGAGCAGGA GCTGGCCAGC GCCCGCGCCG AGGCGCGCAC GGCCGAAGCC
ATGCTGCGAA TGGCCGGCGC CGCGCAGTCC GCGCCCTCGG GACGGTACAC GCTCTCGGCC
CCGCTCGCGG GGACCGTGGT GCGGCGGCCG GCCGTGGTCG GCCTGCTCGC CAGCGAGCGC
GAATCCCTGG CCACCATCGC CGACACCTCG GTGATGTGGG CTCTGTGTGA GGTCGCCGAG
TCCGACGCCG CCGGCGTCGC GCTCGGGCAG CGCGTCCAGG TCGATCTCCA GGGTCGCGAG
GGCGCGCCGC TAGCGGGCGA GCTGACCTGG ATCGCGGCCG AGGTCGATCC GCGTACGCGC
ACGGTCACGG CCCGGGCCGA GCTGGCCAAC CCCGAGGGCC GGCTGCGCGC CAATCAGTTC
GCGCGTGCGC GCATCCACAC CGGGGCCGCG CACGGGGCCG CGCTCGATGC CGTGAGCGTG
CCGCGCGCAG CCGTGCAGCG GGTCGGCGAG CGCGAGGTGG TGTTCGTGCG CACCGGCGTC
GGCGTCTACC AGCCGCGCGT GGTCGTGCGT CACGGCGAGG GCGAGCGCGT CCAGGTCGAG
GGCCGCGTCC AGCCGGGCGA CGAGGTGGTG ACCACGGGCG CGGTGCTGCT GCGCACCGAG
ATCCTGCCGG GCAGCATCGG CGCCGGCTGC TGCGAGGTCG AGCCCCCGGG AGGCGATTGA
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| Protein sequence | MRRWRIFVAL SALLASLLAS ACGERGADRS APQPAAPQLA AAAAEACEHG LPPALCTKCN
PALVAVFQSK GDWCDEHGFP ESFCPICNPD ALIPDVGETP AAIADWCGGH GLPESKCTKC
NPELIPQFQA AGDWCEEHGY PESACPVCNP QEPPSGAERA ALEARVVRFR APDIESSAGI
QSEPAQRAQV AAAIECSARI AFDSDRVADI RAIVPGIVRR VRVELGAEVA RGAPLFELES
TRVGEIQGTL QAARERVRAA QAEVERQRAL RASEIASARQ LELAEQELAS ARAEARTAEA
MLRMAGAAQS APSGRYTLSA PLAGTVVRRP AVVGLLASER ESLATIADTS VMWALCEVAE
SDAAGVALGQ RVQVDLQGRE GAPLAGELTW IAAEVDPRTR TVTARAELAN PEGRLRANQF
ARARIHTGAA HGAALDAVSV PRAAVQRVGE REVVFVRTGV GVYQPRVVVR HGEGERVQVE
GRVQPGDEVV TTGAVLLRTE ILPGSIGAGC CEVEPPGGD
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