| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1456 |
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| Symbol | |
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| ID | 8543838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1972876 |
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| End bp | 1974747 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646386167 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003265902 |
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| Protein GI | 262194693 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.80149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT CTCCGGTCGA CAATTCGCGT ACAGTGGCCG GCACGACGCT CGGGGACGCC
ACGGCGGCCG TGGGTCGGGT CGGCGCGCCG CAACACAGGG CCTTTCTGGC GGTGTATTCC
GACGCCGCGG ACAGCCGCAC GCGCATGGTG GCGCTGCCGG ACGGGGTCGA GGTGGTGTTC
GGCCGCTCGC GCGCGTGCGC CGTGCACGTG GACAGCGAGC GGGTGTCGCG CCACCACGCG
CGCCTGGTGC GCCGCGGCGG CGAGCTGATG ATCGAGGATC TGGGCAGCCG CAACGGCACC
CGGGTCAACG GCGAGCGCAT CGCCGAGGCC ACGGCGCTGG GCTCGGGCGA CGAGATCGCG
ATCGGCCCGG TCACGGCCGT GGTCGGGGTG ACCTCGGGGC TGGAGCGCCG CCACGACATC
GCCGAGGCCG CGGAGCTGGA TGCGCGCCTG GCCGCGGAAG CCGACCGCGG GCAGCGCTAT
CAGCGCTCGT TCGCGCTGGT GATGATGCAG CTCCAGGGCT CGGACGAGGC CATCGATGAG
GCGCTCGACC GGCTGGTGGC GCGCGTGCGG CCGATGGATA CGCTGGCCGA GTACAGCCCG
AGCGAGTACG CGGTGCTGGT GCCCGAGACC GACGCGGCGA CGGGGATGGA CGCGGCCCGC
GAGCTGCTGC GCACGGCCCG CGAGCAGCAC CTCGACTCGC TGCAAGCGCG GGCGCCGGTG
CATGTGCGCG CGGGCCTGGC GGTGTTTCCG CGCCACGCCA GCCAGGCCGG CGAGCTCTTG
TCGCGGGCCC AGGGCGCGCT GCGGCGGGCG CTGGCCGAGG ACGTCGACGA ACCTGTGGTG
GCGGCCGGCG AGGAGCCGGC GCCCAGCGAT GACGAGCTGG TCATCCGCGA TCCGCAGATG
CAGCGGGTGC ACGCGCTGGT GCGCAAGGTC GCCGATACCA ACATCACGGT GCTGATCCTG
GGCGAGACCG GGGTCGGCAA GGAGGTGGTG GCCGAGGCCG TGCACCGCAG CGGCGGGCGT
CAGCAGCGGC CTTTCGTGCG TCTCAACTGC GCTTCGATTC CGGGCAATCT GCTCGAGAGC
GAGCTGTTCG GCCACGTCAA GGGCGCGTTC ACGGGCGCCG ATCGCCAGCA CACGGGCTAC
TTCGAGGCGG CCAGCGGCGG GACCTTGTTC CTCGACGAGA TCGGCGAGAT GCCGGCCGCG
CTGCAGGCCA AGCTGCTGCG CGTGCTCGAG CAGCGGCGCA TCACGCGCGT GGGCGATACC
CGCGAGATCG CGGTCGATAC CCGCGTGGTC TGCGCGACCC ACCGCGACCT CGAGGACGAG
GTGCGCCAGG GCCGCTTTCG CGAGGATCTG TACTTCCGCA TCAGCGTGTT CACGGTGCTG
GTGCCGCCGC TGCGCGACCG GGTGTCCGAA ATCGCCCCGC TGGCGCACTG GTTCGCGCGG
CGGGCGGCGC GCGAGCAGGG CGGGGCGGCG CCGCGGCTCT CGGATGAGGC GCTGGCCGTG
CTCGAGGGTC ACCAGTGGCC GGGCAACGTG CGCGAGCTGC GCAACGCGGT CGAGCGCGCG
TGCGTGCTGC AGGAGGCGGG CGTGATCCTG CCCGAGCATC TGCCCGAGCG CCTGCGTGAT
GCGCGCGCGC CAGCCGGGCC GGGCGCGCTC GCCGGTGCCA ACACCAGCGC CGCCAGCGCC
GCAGACGGAC CACCGGCCGA GGTCGATGTC CGCGAGTACA TCGCCACGGT CGAACGCGAC
GCCATCGTCG CCGCGCTCGA GGAATGCGGC GGCAATCAGA CCCACGCCGC GCGCCGCCTG
GGCATGTCGC GGCGCTCGCT GATCTACAAG CTCGAGAAGT ACGGGCTCAA GAAGAAGCCC
GGGCAGCGCT GA
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| Protein sequence | MSSSPVDNSR TVAGTTLGDA TAAVGRVGAP QHRAFLAVYS DAADSRTRMV ALPDGVEVVF
GRSRACAVHV DSERVSRHHA RLVRRGGELM IEDLGSRNGT RVNGERIAEA TALGSGDEIA
IGPVTAVVGV TSGLERRHDI AEAAELDARL AAEADRGQRY QRSFALVMMQ LQGSDEAIDE
ALDRLVARVR PMDTLAEYSP SEYAVLVPET DAATGMDAAR ELLRTAREQH LDSLQARAPV
HVRAGLAVFP RHASQAGELL SRAQGALRRA LAEDVDEPVV AAGEEPAPSD DELVIRDPQM
QRVHALVRKV ADTNITVLIL GETGVGKEVV AEAVHRSGGR QQRPFVRLNC ASIPGNLLES
ELFGHVKGAF TGADRQHTGY FEAASGGTLF LDEIGEMPAA LQAKLLRVLE QRRITRVGDT
REIAVDTRVV CATHRDLEDE VRQGRFREDL YFRISVFTVL VPPLRDRVSE IAPLAHWFAR
RAAREQGGAA PRLSDEALAV LEGHQWPGNV RELRNAVERA CVLQEAGVIL PEHLPERLRD
ARAPAGPGAL AGANTSAASA ADGPPAEVDV REYIATVERD AIVAALEECG GNQTHAARRL
GMSRRSLIYK LEKYGLKKKP GQR
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