Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1449 |
Symbol | |
ID | 8543831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1961683 |
End bp | 1962342 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646386161 |
Product | YhhN family protein |
Protein accession | YP_003265896 |
Protein GI | 262194687 |
COG category | [S] Function unknown |
COG ID | [COG3714] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.574158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAGGA GTCGCGTGTT CTGGGCGGCC GTGTTGCTGT CTATCATCAG TGTGGCCGCG CGCATGGCGG GCGGGTTTCC CGGCTACCCG CTGCTCAAGG CCTTGCCCAT CTGGCTGCTG GCCTGGCTGG CGCGACCGCG CATCGGCGTG CACCGCGACC GAGCGCTGTT TCTCGGACTG CTGTTCTGTT CTGCCGGCGA CCTCGCGCTC ACCCAGGCGC GCGCCTACCC GCGCGCGTTC CTCGCAGGCC TGCTGCTGTT TTTGATCGGA CACCTGCTCT ACACCACGCA CTTCTGGCGC GACATGCGTT TCTCCGCGCC GCGCATGGTA CCGGCGCTGT TGCTGGTGGG GTTTTTCTTC GTCTTCACGG TGTGGCTCTC GCCCGGCATG GCGCGGATGG GGTTTCCCGC CTTTGCCTAT GTGCTGGCGA TCTCGGCCAT GACCCTGTCG GCGTTGTTTC GCCACGCGCG CGGCTGGCAT ACCGTGCTGG TCGGCGCGCT GCTGTTCGTC ATCAGCGACA GCCTCATCGC CATCAGCGTG TTTCGCGAGC CGCTGCCCGA GCCCCTGCGC GACCTGCTGA TCCTCGGCAC CTACTATCCG GCGCAGCTCC TCATCACCGC CGGCAGCCTG CGCGGCCGCG ATAGCGCCAC GCCGGAGTAA
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Protein sequence | MLRSRVFWAA VLLSIISVAA RMAGGFPGYP LLKALPIWLL AWLARPRIGV HRDRALFLGL LFCSAGDLAL TQARAYPRAF LAGLLLFLIG HLLYTTHFWR DMRFSAPRMV PALLLVGFFF VFTVWLSPGM ARMGFPAFAY VLAISAMTLS ALFRHARGWH TVLVGALLFV ISDSLIAISV FREPLPEPLR DLLILGTYYP AQLLITAGSL RGRDSATPE
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