Gene Hoch_1449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1449 
Symbol 
ID8543831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1961683 
End bp1962342 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content67% 
IMG OID646386161 
ProductYhhN family protein 
Protein accessionYP_003265896 
Protein GI262194687 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.574158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA GTCGCGTGTT CTGGGCGGCC GTGTTGCTGT CTATCATCAG TGTGGCCGCG 
CGCATGGCGG GCGGGTTTCC CGGCTACCCG CTGCTCAAGG CCTTGCCCAT CTGGCTGCTG
GCCTGGCTGG CGCGACCGCG CATCGGCGTG CACCGCGACC GAGCGCTGTT TCTCGGACTG
CTGTTCTGTT CTGCCGGCGA CCTCGCGCTC ACCCAGGCGC GCGCCTACCC GCGCGCGTTC
CTCGCAGGCC TGCTGCTGTT TTTGATCGGA CACCTGCTCT ACACCACGCA CTTCTGGCGC
GACATGCGTT TCTCCGCGCC GCGCATGGTA CCGGCGCTGT TGCTGGTGGG GTTTTTCTTC
GTCTTCACGG TGTGGCTCTC GCCCGGCATG GCGCGGATGG GGTTTCCCGC CTTTGCCTAT
GTGCTGGCGA TCTCGGCCAT GACCCTGTCG GCGTTGTTTC GCCACGCGCG CGGCTGGCAT
ACCGTGCTGG TCGGCGCGCT GCTGTTCGTC ATCAGCGACA GCCTCATCGC CATCAGCGTG
TTTCGCGAGC CGCTGCCCGA GCCCCTGCGC GACCTGCTGA TCCTCGGCAC CTACTATCCG
GCGCAGCTCC TCATCACCGC CGGCAGCCTG CGCGGCCGCG ATAGCGCCAC GCCGGAGTAA
 
Protein sequence
MLRSRVFWAA VLLSIISVAA RMAGGFPGYP LLKALPIWLL AWLARPRIGV HRDRALFLGL 
LFCSAGDLAL TQARAYPRAF LAGLLLFLIG HLLYTTHFWR DMRFSAPRMV PALLLVGFFF
VFTVWLSPGM ARMGFPAFAY VLAISAMTLS ALFRHARGWH TVLVGALLFV ISDSLIAISV
FREPLPEPLR DLLILGTYYP AQLLITAGSL RGRDSATPE