Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1435 |
Symbol | |
ID | 8543817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1941224 |
End bp | 1946104 |
Gene Length | 4881 bp |
Protein Length | 1626 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646386147 |
Product | serine/threonine protein kinase with WD40 repeats |
Protein accession | YP_003265882 |
Protein GI | 262194673 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCAAGT CCGGGCGGCG GCATCCCGAG GATGCCACGC GCGGCGACCA GAGCGCGCCG GCGGAGGACG CGCCGCGGGC ACCGTTCCGC CAGCAGGTCA CCGAGCCTGT GCGAGCGCGC TTCGAGACCA CCGATGTGTG TCCGTCTGAC GCCGAGGAGA CGCAGTGGGA CCAGGCGCCC AGCGCGCCCC ACGCGGACGA GGCGGCGACT GTGGCCATGG CCGTCCCCGC CGCGCCCAGC GCTCCCCGCG CCCAGCCGCT GGCCGGCACG CGCATCGGCA AATACGAGCT CATCCGCTCG CTCGGCCGCG GCGGCATGGG CGAGGTGTTC CTGGCCCGCG ATCTGCGCCT GGGCCGACGC GTCGCGATCA AGCGGCTGAG CAGACCCCAC CCGGAGTTGG CCCGGCGTTT CCTGCGCGAG GCGCGGACCA CGGCACAGTG CACGCACGAG AACATCGTCG TGATCCACGA GGTCGGCGAA ATGGCGGAAT CCGGGGACCG CCCCGGCGAG CCGTACATGG TGCTCGAGTA CCTCGAGGGC CAGACCCTGC GCGAGTGGCT GCGCGAACGC TCGGCGCTGG CCGGCGGGCC GGTTCCGGTG CCGATCAGCC GGACGCTGGA GCTGATGTTG CCGGTGATTC GCGCCCTGGC CTACGCGCAC GAGCGCGGCG TCGTCCACCG CGACCTCAAA CCCGAGAACG TCATGCTCAC GCGCGCGGGC GCAATCAAGG TGCTCGATTT CGGCATCGCC AAGCTGCTCG ACTCGGTCGA TATCGAGCAC GAGTTCGCCG AGCTGGTATC GGGACAGACG TCCGTGCGCT TCGAGACCCG CAGCAGCGGC CTCATCGGCA CGCTGCCGTA TATGTCGCCC GAGCAGATGA ACGCCAGCAA CATCGACCAC CGCAGCGACA TCTGGACCGT TGGCATCATG CTGCTCGAGC TGGTCGCCGG CCACCACCCG CTGAGAATGG ATTCGCCCGC CGAGCTGCTG CGCGTGGCCG ACGAAGACGA ACCCATGCCG AGCGTGCTCG ACATTCTGCC CGGCCGCGCG GCCGAACTGG GCGCGCTCGC CAGCATCATC GACCGCTGCC TGCTCAAGCA GCCCGAGCAC CGAACGCCGA ACGCGCGCGC GCTGCTCGCC GAACTCGAGG CCTTGGCGCC CGGGCGACTG CCCAAGCGCG CGGGCGACGA CGGCAACCCC TTCGCCGGCC TGGCCGCGTT TCAGGAACAC GACGCCGATC GCTTTTTCGG ACGCGAACGC GATATCGACC ACGTGGTCGG TGAACTGCGC AGCCGACCAT TGGTCGCCGT GGCCGGCCCC TCGGGCGCGG GGAAATCCTC GCTGGTGCGC GCCGGCGTCA TTCCCACGCT CAAACGCTCG GGCGAGGGCT GGGACGCGCA CGTGGTGCGA CCGGGGCGCG CGCCGCTGGC GGCTCTGGCC GCCCTGCTGA GCTCGCTCAC GCAGAACCAG TCGCACGATA GCAACGACGA GCACTGGAAT GCCCGCACCG CCACCGGCGC AGCAGACGCC GCAGATTTCG CAAACAGCCC AGATGCCGCA GACGCCGAAG ACTTCGCAAA CAGCTCAGAT GCCGCAGACG CACGGCGCGA CACGCTCGCC GACAGCGCCT CCAACGCGGT CCTCGGCCCG CTCATCGAGC GCATACGCAG CGAGCCCGGC TACCTGGGCA CGCGGCTGCG CGCGCGCGCC CACAGCAAGC TGCGCCGCTG CGTGATCTTC GTCGACCAGC TCGAGGAACT CTACACCCTG GGCGCCCCCG CGGCCGAGCG CACCGCGTTC CTCGCCAGCC TGGCGGCCGC GGCCGATGAC GCCGCGTCGC CCCTGCGCGT GCTGGTATCC ATGCGCTCGG ACTTTCTCGA CCGACTGACC GAGGACCGCG GTCTGGGTCG CGAACTCACG CGCGGTCTGC TGCTCTTGCC GGTCATGGAC AGCGACAGCA TGCGCCAGGC GCTGCTGGGA CCGCTCGAGG CCGCCGGCTA CCGCTTCGAG TCGCCCACGC TGGTCGAGCG CATGCTCGAC GAGCTGGCGC AGACCTCGGG CGCGCTGCCG CTCCTGCAGT TCACGGCCGC GCGCCTGTGG GAGCTGCGCG ACACCGGGCG GCGGCTGCTC ACCGAGGCCA GCTACGAGCG CATCGGCGGC GTCGGCGGAG CCCTGGCCAC GCACGCCGAC GCGGTGCTGG GCAGCCTCTC GAGCGCGCGT CAGGGCGTAG TCCGAGCGGT GTTCGAGCGC CTGGTGACGC CCGAGCGCAC CCGCGCGCTG GTGAGCGCGG ACGAGCTGCA CGCGCTGCAC GACGATTCCG TCATGGTGGA CGAAATCGTC CAGCACCTGG CCGCCATGCG CCTCGTGGTC ATCACCCGCG GCGAGCTGGC CGATGAGCAC ATGGTCGAGC TGGCCCACGA ATCGCTCATC GAGCGCTGGC CCACGCTGGC CCGCTGGCTC GACGAAGATC AAGAGGATGC GGCGCTGCTC GCGCGATTGC GCGGCGCCGC CCGCGACTGG GAGCGCAGCG GTCGCGCGCA CGGCCTGCTG TGGTCGGGCG CCGCCGCGCT CGAGGCCTGG GCCTGGCAGC AGCGCTACCC GGGTGCGCTC GCGCCCGCAG AAGAGCGCTT CCTCTCCGCC ATGCGCGCGG CCAGCGAGCA CTCGCGGCGC CGTCGGCGAC GCTGGACGGT CTTGTCCCTG GTCACGCTCA TGCTGCTCGC GCTGACCATG GGGTGGCAGG CCTGGTTCCA GAGCGAGGCC AACCGCAAGA TCGAGCGCGC CGCGGACCAG GCCGAACGCG AGGCCACCCA CGCTCGCGAC GCCACGCGCA TGTCGGCGCT GCGCCTGTTG AGCGACGATC CCACCACCCA GCTCGCGCTT CTCCGCGAAA TCGAGGACAC CGCGTCGCCA CCGCCCGGCG CCGTCCAGGA GGCCAAGCGC CTGCTGCACA GCGACATCGC CCTGCGGGTG TTTCTCGGAC ACGAAGACGC GGTGTTCTCG GTGAGCTACA GCCCCGACGG CAGCCGCATC GTGTCCGCGT CCCACGACAA AACCGTACGC GTGTGGAACG CCGACGGCTC CGGCGAGGCC ATCGTCCTGC GGGGACACCG GGGCGCGGTT AGCTCTGCAA ACTTCAGCCC TGACGGTGCG TACATCGTCT CGGCCTCGGA GGACAGCACC ATCCGCGTGT GGCGCGCCGA CGGTACCGGC CAGGCAGAGA TCCTGCGCGG CCATGAGGGC GCGGTCTACT CAGCGAACTT CAGCCCCGAC GGCAGCCGCA TCGTCTCGGC CTCACAGGAC AAGACCGTGC GCGTGTGGCG CGCCGATGGC ACGGATGAGC CCCTGGTTCT GTACGGCCAC GACGACGCCG TCAGCTCGGT GCGCTTCAGC CCCGACGGCG CCCGCATCGT CTCGGCATCG TGGGATACTA CGCTGCGACT GTGGAACAGC GATGGCTCTG GCCACCCCCA TGTCTTCCCC GGTCATGAAG ACCAGGTCAC CTCCGCGCGC TTCAGCCCCG ACGGCGCCCA CATTGTCTCT GCCTCGCACG ATGGGACCAT GAGGCTGTGG CGCAGCGACG GCACCGGCGA GCCGGTGGTC TTCCGCGGTC ACGACTCCGG GCTGACATCT GCGCGCTTCA GCCCTGACGG CGTCCACCTC ATCTCCGCAT CGACGGACCA GAGCGTCCGC GTGTGGCGCG CCGATGGCTC CCGGCCACCT CAGGTCCTGC GCGGACACGA TGACGTGGTC GAATCGGTGG CCCTCAGTCC CGACGGTGGA TACTTCGTCT CCGCGTCGTG GGACGGCAGC ATTCGCATGT GGCCGCTCGC CGGCTCGGGC CAGCCTCTAC TTCTGGACGG CCACACGCGC GAGGCCTTGT CGGCCAGCTT CAGCCCCGAC GGCACCCGGC TGGTGTCGAG CTCGTGGGAC AAGGACCTGC GCGTCCACAG CGCCAACGGC TCGGGTCAGC CCCTGGTGCT GCGCGGCCAC GAGGCCGCCG TGTGGCACGC CGAGTTCAGC CCCAGCGGCG AACGCATCGT CTCCGCCTCG ATCGACAAGA GCATGCGCAT CTGGAACGCC GACGGCTCGG GCCAGCCTCT AATCCTGCGC GGCCACGAGG ATCGCGTCAG CTCGGCCGGC TTCAGCCCCG ACGGCGATCG CGTCGTGTCC GCCTCGTACG ATAAAACCGT GCGCGTGTGG AACGCCGACG GGTCCGGCGA GGCCATGGTG TTGCGCGGTC ACTATGATCG GGTCACCTCG GCCCAGGTCA GCCCCGACGG CGCCCGCGTC CTCTCAGCCT CGTGGGATAA GAGCATCCGC ATCTGGAACA TCGACGGCTC GGGCCGCCCC GCGATCTTGC GCGGGCACCA CGACGCGGTG TGGTCGGCGC GCTTCAGCCC CGACGGCGAA CGCATCGTCT CGGCGTCCTT CGACAAGAGC GTGCGGGTGT GGAGAACCGA CGGCTCGGAG CCGCCCATCG TGCTGCGCGG ACACGAGGAC TGGGTCATGT GGGCCGAATT CAGCCCTGAC GGCCGTTATA TCGTCTCGGC GTCCAAGGAC AAGACCATCC GCATCTGGCG CAGCGACGGC AGCGGCGAGC CCGTCGTCCT CCGCGGCCAC GATGCCTGGG TCAACAAAGC CCGCTTCAGC CCCGATGGCG GCCGCATCGC ATCAGCCGCG GACGATAGAA CCGTGCGCGT GTGGAACGAA CTCGGCGATG TCGCGCTCGA TGATCCGCGA CTGTGGACGC TCACCGACTA CTGCATGCCG GTCAAGCGCC GCGTCCGCCT GCTGGGCGTG ACCGAGGCGA TCGCGCGCGC CAACCGCAGA CGCTGCCTGG GACGCGTGGA CGAGATCCGC CGCGCGACGC CTCCGCCGTG A
|
Protein sequence | MSKSGRRHPE DATRGDQSAP AEDAPRAPFR QQVTEPVRAR FETTDVCPSD AEETQWDQAP SAPHADEAAT VAMAVPAAPS APRAQPLAGT RIGKYELIRS LGRGGMGEVF LARDLRLGRR VAIKRLSRPH PELARRFLRE ARTTAQCTHE NIVVIHEVGE MAESGDRPGE PYMVLEYLEG QTLREWLRER SALAGGPVPV PISRTLELML PVIRALAYAH ERGVVHRDLK PENVMLTRAG AIKVLDFGIA KLLDSVDIEH EFAELVSGQT SVRFETRSSG LIGTLPYMSP EQMNASNIDH RSDIWTVGIM LLELVAGHHP LRMDSPAELL RVADEDEPMP SVLDILPGRA AELGALASII DRCLLKQPEH RTPNARALLA ELEALAPGRL PKRAGDDGNP FAGLAAFQEH DADRFFGRER DIDHVVGELR SRPLVAVAGP SGAGKSSLVR AGVIPTLKRS GEGWDAHVVR PGRAPLAALA ALLSSLTQNQ SHDSNDEHWN ARTATGAADA ADFANSPDAA DAEDFANSSD AADARRDTLA DSASNAVLGP LIERIRSEPG YLGTRLRARA HSKLRRCVIF VDQLEELYTL GAPAAERTAF LASLAAAADD AASPLRVLVS MRSDFLDRLT EDRGLGRELT RGLLLLPVMD SDSMRQALLG PLEAAGYRFE SPTLVERMLD ELAQTSGALP LLQFTAARLW ELRDTGRRLL TEASYERIGG VGGALATHAD AVLGSLSSAR QGVVRAVFER LVTPERTRAL VSADELHALH DDSVMVDEIV QHLAAMRLVV ITRGELADEH MVELAHESLI ERWPTLARWL DEDQEDAALL ARLRGAARDW ERSGRAHGLL WSGAAALEAW AWQQRYPGAL APAEERFLSA MRAASEHSRR RRRRWTVLSL VTLMLLALTM GWQAWFQSEA NRKIERAADQ AEREATHARD ATRMSALRLL SDDPTTQLAL LREIEDTASP PPGAVQEAKR LLHSDIALRV FLGHEDAVFS VSYSPDGSRI VSASHDKTVR VWNADGSGEA IVLRGHRGAV SSANFSPDGA YIVSASEDST IRVWRADGTG QAEILRGHEG AVYSANFSPD GSRIVSASQD KTVRVWRADG TDEPLVLYGH DDAVSSVRFS PDGARIVSAS WDTTLRLWNS DGSGHPHVFP GHEDQVTSAR FSPDGAHIVS ASHDGTMRLW RSDGTGEPVV FRGHDSGLTS ARFSPDGVHL ISASTDQSVR VWRADGSRPP QVLRGHDDVV ESVALSPDGG YFVSASWDGS IRMWPLAGSG QPLLLDGHTR EALSASFSPD GTRLVSSSWD KDLRVHSANG SGQPLVLRGH EAAVWHAEFS PSGERIVSAS IDKSMRIWNA DGSGQPLILR GHEDRVSSAG FSPDGDRVVS ASYDKTVRVW NADGSGEAMV LRGHYDRVTS AQVSPDGARV LSASWDKSIR IWNIDGSGRP AILRGHHDAV WSARFSPDGE RIVSASFDKS VRVWRTDGSE PPIVLRGHED WVMWAEFSPD GRYIVSASKD KTIRIWRSDG SGEPVVLRGH DAWVNKARFS PDGGRIASAA DDRTVRVWNE LGDVALDDPR LWTLTDYCMP VKRRVRLLGV TEAIARANRR RCLGRVDEIR RATPPP
|
| |