Gene Hoch_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1408 
Symbol 
ID8543790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1894495 
End bp1895202 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID646386120 
Producthypothetical protein 
Protein accessionYP_003265855 
Protein GI262194646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.664659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACA GCGAAGCGAA TGCCACCACC ACGCGGCCGA GCGTTCTCGA CCCGCACTGC 
GAGCAGCTCA TCGATCACGC GGCCGGCGCT GGCGCCTGGG TGCTCCAGAG CATCAGCGTC
ATCGGGTACC ACGAGATTCT GAAAAATCTC TATCATGTGG TGATGGATTC GGTGCCCCTG
ATGCAGCACG CGGCCGGCAT CCTCGAGCGT GAGCAGTCCA GCGGGGACGA CTATCTCGGC
CGGTACCGCG ACTATCTCCG GCATCACATC GAGGAAGAGA GCGGACACGA CATCTGGCTG
CTCGAGGATC TCGAGGCGTT GCACGGCGCG GGAATCGAAT CGGACGAACG TCCGGTCAAC
GAGCATCTCG CCCGCATGAT GGCCGGTCAT TGGCACGCGC TGCACGGCGA TAATCCCTGG
TTGCTGCTCG GGCACATGTG GGCGCTCGAA TCGCGTCCGC CCTCGGCGCG CGGACTGCGC
GCCCTGCGCG AGCGACTCGG CCTGTCCGCC GCGATGACGC ACGCCTACGA GCACCACGCG
GTCGCCGATC CCGAGCACGC ACGCGGACTC GCGACGCTGA TTGCCGAGCC CGCGCTGTCC
GAGGAGATCC GCGCCGATAT CACGCTCGGC GCGCGTATTA CGGCTACCGG TGTCGCCCGC
TTCTGGCTCG AGCTCGGCAA GCGCTACGGC CTGATGCCCG CGGCGTAG
 
Protein sequence
MNHSEANATT TRPSVLDPHC EQLIDHAAGA GAWVLQSISV IGYHEILKNL YHVVMDSVPL 
MQHAAGILER EQSSGDDYLG RYRDYLRHHI EEESGHDIWL LEDLEALHGA GIESDERPVN
EHLARMMAGH WHALHGDNPW LLLGHMWALE SRPPSARGLR ALRERLGLSA AMTHAYEHHA
VADPEHARGL ATLIAEPALS EEIRADITLG ARITATGVAR FWLELGKRYG LMPAA