Gene Hoch_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1403 
Symbol 
ID8543785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1884159 
End bp1884935 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID646386115 
Producthypothetical protein 
Protein accessionYP_003265850 
Protein GI262194641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGT CTGCCTCGCG GGTGTCTGCC CTCTCTCATT CCTTGCTCGT GTGCGCGGCC 
CTCGTCGGCA CCGCCAGCTG CGAACTCTCG GGCCCCGACA TGGATCCCGC GCAGCAACTC
GAGAACGACT TCGGCGGCCC CGACGGCCTC GTGGACTTTT TCGAGAGCCA CAGCGAAGAC
GAGATCCGCG ACACCCTGGC CGCGTACGAG CTCGGCTACG TCACCGAGGC GTCGGTCACC
GACTGCCCGA AGACCTTCGG CTCGAGCTTC CGCAGCACCT GGTACAGCAT CACGGGCGAG
CACTACTACA TCGACTCGAA GGGCCGCCCG AGCAAGGCCT ACGCGTATCT GCCGCCCGCC
ATCACCGAGG CCCGCAACTC CTCCTGCCAG GCCAGCGTGG GGCAGTGGGG CGACGCGGCC
AACCCCGGCA CCGACTACGA CGGCGGCCAC TTGATCGGCT CTCAGCTCGG CGGTTGGGGC
GCCCGCGCCA ATCTCGTGCC GCAGCAATCC AACTTCAACC GCGGCAACTA CGTGCAGCTC
GAGAACAAGA TGGCCAACTG CGACGGGCTC AGCAGCGGAC GCATGCTGTA CTCGGTCACG
GTGAGCTACC CCAGCAGCAG CACGCTCATC CCGAGCAACT GGAACGTGTT CATCAAGGAT
CAAGCGCAGG GCGACTACGT GTCGCTCAAC TTCACGAACA GCCACCAAGG CGGCTCCAAC
GGCACCAACG AGCGCGCGCG CGGCGTCGAC TTCTTGTCCG CCAACGGCTG TAACTGA
 
Protein sequence
MNKSASRVSA LSHSLLVCAA LVGTASCELS GPDMDPAQQL ENDFGGPDGL VDFFESHSED 
EIRDTLAAYE LGYVTEASVT DCPKTFGSSF RSTWYSITGE HYYIDSKGRP SKAYAYLPPA
ITEARNSSCQ ASVGQWGDAA NPGTDYDGGH LIGSQLGGWG ARANLVPQQS NFNRGNYVQL
ENKMANCDGL SSGRMLYSVT VSYPSSSTLI PSNWNVFIKD QAQGDYVSLN FTNSHQGGSN
GTNERARGVD FLSANGCN