Gene Hoch_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1389 
Symbol 
ID8543771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1857147 
End bp1857704 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content66% 
IMG OID646386101 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003265836 
Protein GI262194627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.533995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTT TTCATCGCGT CATTGTGGAT TCCGAGCCCC GTCTCTTTTC AGAGGTGATG 
TCGGTTGTGA GAGAGGAGAG CGAGCGGTCG GATTGCCGGA TGGTCGTCCA ACCGGTCGAA
TTCTACCGGC GATTCCAGGG CGATGCCGGC GCGATCTTCG TGGCCTACGA CGGCGAGCGG
GTGGTGGGGT TTTCCCTGCT GGCGAGGGCT CCGCGCATCA ACGCGATCTG GTCGCCGTAT
ATCGAGGAGC TGCGCGCGGA CCGCGCGGTC TGTGGCGTTC TGGTGCAGAA CCTCGTGCGG
ACCGGCTATC GCGGCTGCGG AATTGGTCGG GCGTTGGCGC GTCTGCGCAT CGAGTACGCC
GAGGCGCGCG GCGTCCGGCA TCTGTTCGCG ACAGTCGAGC CGAGCAACGC GGCGTCGCTC
GCGGTCATGA CGAACGCCGG GTTCTACGAG CTGGAGCGCA AGCTGGTGTA CGAGGAGCAG
GTGCCGCGGG TTCTGTTCCA CCGCGCTTCG CGCTCGCCTA CGGGCCGCGC TGTGAGAGCG
TCGCGGCCGT CGGCGTAG
 
Protein sequence
MLRFHRVIVD SEPRLFSEVM SVVREESERS DCRMVVQPVE FYRRFQGDAG AIFVAYDGER 
VVGFSLLARA PRINAIWSPY IEELRADRAV CGVLVQNLVR TGYRGCGIGR ALARLRIEYA
EARGVRHLFA TVEPSNAASL AVMTNAGFYE LERKLVYEEQ VPRVLFHRAS RSPTGRAVRA
SRPSA