Gene Hoch_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1387 
Symbol 
ID8543769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1855731 
End bp1856372 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content70% 
IMG OID646386099 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003265834 
Protein GI262194625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGGGT CCGAGACCGT GGCTGATTCC GCACAGACGC CGCGCCGCAC CCAGGGGGTC 
CTCGGCGGAC GAAGCGAGCA GGTGGTCCGC CGGGTGCTCG ATGCCGCGCT CGTCGAGCTT
GCGAGTTCGG GGTACGCGGG CTTCCGGATG GAGGCGGTCG CGTCGCGGGC CGGGGTCAAC
AAGACCACGA TCTATCGCCG CTGGCCGAGC CGTGCGGAGC TGATCGCGGC GCTCGTGAGT
CGGATGCGGA CGCCCCTGCG CGCGAGTCCG CTGCCCGACA CCGGACAGCT CGAGAGCGAT
CTCGTCGACG CCTTTACCCG GCGATTCCGC GTCGCTCGCA AACGCGAGGG GCGAGCGTGG
GCCCGGCTGG TCGAAGAGCG ACACAATCCC GAGGTCGAGG CGATCATCGG CAATGCGGTC
GACGGACGTC GCGACGAGTG GCGCTTGATG GTCACGCGCG CCATCGAGCG CGGCGAGCTG
CCGACGGGGA CCGATGCCCA GATGCTGCTG GATTTCGTCC GCGCGATTGT CGATTCGCGC
GGTTCGTCGC GTCGATTGGA CGCGGCCTGG CTGCGCGCCG CGGTGAGGAC GATCATCGCC
GGCGCCCGCG CTGGAAGCTT GCGTGGCGAA ACGCGAGAAT GA
 
Protein sequence
MLGSETVADS AQTPRRTQGV LGGRSEQVVR RVLDAALVEL ASSGYAGFRM EAVASRAGVN 
KTTIYRRWPS RAELIAALVS RMRTPLRASP LPDTGQLESD LVDAFTRRFR VARKREGRAW
ARLVEERHNP EVEAIIGNAV DGRRDEWRLM VTRAIERGEL PTGTDAQMLL DFVRAIVDSR
GSSRRLDAAW LRAAVRTIIA GARAGSLRGE TRE