| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1320 |
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| Symbol | |
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| ID | 8543702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1748398 |
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| End bp | 1749084 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646386036 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003265771 |
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| Protein GI | 262194562 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCACG ACCATCGCGA CGACGACGAG GGCAAGCCTG CCCTCGCAGA GGACAGCGAG
TACATCGACG AAAACGTGCT TGGCGATGCG GACGTCCTCG AGGACGACGA CGAGCGCGGA
GAGAGCGACG GCGACGAGGT CTCGGATGCA GAGTTGTTCG CGTCGTGGGC TGCCGGCGAC
AAACACGCGG CGGACGTGCT CATCCGCCGC TATATGGACA AGCTGAGCGG CTATTTCGCT
GCCAAGCTGT CTCAGGGCGA CAGCGTGGCC GATCTGGTGC AGCAGACCCT GGAAGGCTGT
CACCGCGCGG CGCCCAGCTT TCGCGGCGAG TGTTCATTCC GCACCTTCCT GTACAGAGTG
GCCGGAAACA AGCTCCGCGA TTTCCTGCGC GGCAAAGCCC GGCGACCTCG GGCCGAGGAT
ATCGACGAGA TATCGGTAGC CGACCTCAAC CCCGGGCCGT CGACCATCCG GCGCCAAAAC
CATCGCCAGG CCGTGCTCCT GGATGCCCTG CGCAGCCTGC CGCTGCAGAT GCAGGAACTC
CTGGAGTTTC GCTACCAGCA AGATCTGTCC ATTCGCGAGA TCGCCGAGAT CCTCGGCATC
GAAGTCAGCG CGACCAAGAG CCGGCTGCGC CGGGCCAAAG AGGCGCTGCG CAGAGCCCTG
GGGACATCGG GCGCAGACGC GCTCTAG
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| Protein sequence | MDHDHRDDDE GKPALAEDSE YIDENVLGDA DVLEDDDERG ESDGDEVSDA ELFASWAAGD
KHAADVLIRR YMDKLSGYFA AKLSQGDSVA DLVQQTLEGC HRAAPSFRGE CSFRTFLYRV
AGNKLRDFLR GKARRPRAED IDEISVADLN PGPSTIRRQN HRQAVLLDAL RSLPLQMQEL
LEFRYQQDLS IREIAEILGI EVSATKSRLR RAKEALRRAL GTSGADAL
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