Gene Hoch_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1314 
Symbol 
ID8543696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1740741 
End bp1741247 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID646386030 
ProductCRISPR-associated protein, Cmr5 family 
Protein accessionYP_003265765 
Protein GI262194556 
COG category[L] Replication, recombination and repair 
COG ID[COG3337] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01881] CRISPR-associated protein, Cmr5 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACT CACCCTGCAC GATCGAGCAA CAGCGTGCGG CCGACGCGCT CAGCCGGATC 
CACGAGCTCC GAGATCAGCG CGATTGTGGC AACTATCGCA GCTACGCCGA ACGCCTACCG
GCGCAGATCG TGACGAACGG ACTGGGTCAG GCGCTAGCCA TGCTGCGCTC CCGGTACACC
GAGGATGATC AGCCACCTCG CCAGGCCAGA GATGGCGCGC GCCGCCAACG CGGTCGAGAT
CACGATGACC CGCTCGCGGA TCGCGAGCCG TCGAACGCAC GCGACGAAGT CGCCTATCGC
TACCTCTTCC AGCACGTGGG CGGCTGGTTG TGCCGCGATC ACGCAAGCGC ACCGTATCGC
GGCGTCGCGC TCAACGCGCT GTTGATGAAG CTGAGCACCT GCGATCAAGA CACCTATGTG
CGCGCCCACG CCGAGGCGCT GGCCTACTTG AACTGGCTCA AAAAGTTCGC GCGCGCATTC
CTGAGCGCCA GCAAGGACGA GCCATGA
 
Protein sequence
MSDSPCTIEQ QRAADALSRI HELRDQRDCG NYRSYAERLP AQIVTNGLGQ ALAMLRSRYT 
EDDQPPRQAR DGARRQRGRD HDDPLADREP SNARDEVAYR YLFQHVGGWL CRDHASAPYR
GVALNALLMK LSTCDQDTYV RAHAEALAYL NWLKKFARAF LSASKDEP