| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1313 |
|---|
| Symbol | |
|---|
| ID | 8543695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 1739644 |
|---|
| End bp | 1740744 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646386029 |
|---|
| Product | CRISPR-associated RAMP protein, Cmr6 family |
|---|
| Protein accession | YP_003265764 |
|---|
| Protein GI | 262194555 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1604] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01898] CRISPR-associated RAMP protein, Cmr6 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG ACAAAGAACT GTTTCTGCAC GCGGATGCCG CTCGACACCC CACGACATCC
AGACGAAGCA CGGACACGCA CGCGGGGCTC TGGTATGACA AATACTATCG ATGGCCCGCG
TCCGAGAACC AGTCGTCCGT GAGCAAGGAT CGCGGGCAAC GGGAATGGCT CCAAACCCTC
ACGACAGGCG ACCCCATAGC TCGTGCCGAC CGATTGGACG AATTCGCCGG CCGCCGCGAG
CGATTGGCGC AGTTTCATGG GGGCCGCACG CTTTATGCGC GAACGACCAG CCGCTTCGTC
ACCGGACTGG GCCGGGCGCA TCCGGTCGAG AACGGCTTCG CCTGGCACCA CAGCTTGGGC
ACCCCGTATC TACCCGGCTC GGGCATCAAG GGTCTCGTGC GCGCCTGGGC CGGGCGTGCG
CAGTATTCTG CGGAGGATAT CGATGCCCTC CTGGGCAAAG CGCCAGGCCG AAATCTCGCG
GCCGAAGTCG GTCGGGTGAT ATTCCTCGAC GCAGTGCCCA CAGTGCCACC GCAGCTCGAG
GCCGACGTGA TGACACCGCA CTACGGCGCC TACTACCAGC AAACCGAAGC CCCCGGTGAC
TGGCTCTCCC CGGTGCCGAT AGTGTTCCTG GTGGCGGCCG CCGGGCTCGA ATTTCAGTTT
CCGGTGCTGC CCAGCGCTCG GAACAGCGCG ACGGCCGCCT CGGACGATGA CCTGGAGACT
GTCATTGACT GGATGCAGCA TGCACTGCGC GACGTGGGCG CCGGCGCCAA GACCGCAGTG
GGTTACGGTC GGTTCGCGGA CGCTTGGAGT GGCCTGCGTT ATCCCCTCTG GGTGAAGGAC
CTCACCGAGC GGCGCGAAGC CCAACGTCCG CCGCTCGAGC GCGCAATTAT CGCGGTGCAG
GATATGCCTG AACAGGAGGC GCTAACGCTC GTACGCGTAC TGTCGCAGGG CGGAAGCGAG
CATTCCGACA TGGAGCGAGA GCACCTGCGT GCGGCGCTGT GCCAGGTCTA CCTGGAAGCG
TGGAGTCAGC GCGGTGGTAT GGGCAACACC GGTGAGAAGA AGCGCAAGCT CTACCTGCGC
TGGCTTCGAG GCGAGACCTG A
|
|---|
| Protein sequence | MSADKELFLH ADAARHPTTS RRSTDTHAGL WYDKYYRWPA SENQSSVSKD RGQREWLQTL
TTGDPIARAD RLDEFAGRRE RLAQFHGGRT LYARTTSRFV TGLGRAHPVE NGFAWHHSLG
TPYLPGSGIK GLVRAWAGRA QYSAEDIDAL LGKAPGRNLA AEVGRVIFLD AVPTVPPQLE
ADVMTPHYGA YYQQTEAPGD WLSPVPIVFL VAAAGLEFQF PVLPSARNSA TAASDDDLET
VIDWMQHALR DVGAGAKTAV GYGRFADAWS GLRYPLWVKD LTERREAQRP PLERAIIAVQ
DMPEQEALTL VRVLSQGGSE HSDMEREHLR AALCQVYLEA WSQRGGMGNT GEKKRKLYLR
WLRGET
|
|---|
| |