Gene Hoch_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1290 
Symbol 
ID8543672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1698047 
End bp1699072 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID646386006 
ProductMethyltransferase type 12 
Protein accessionYP_003265741 
Protein GI262194532 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.830154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.108647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC GCTACACACA GATGATCACG GGCGCCGCGG TGATGGCGGT CATGGCCGTG 
GCCGATCGGA CGGGTCTGCT CCGCTGGCTG GCCGGGCGCG GACCGGTCAC GCCAAGCCGG
ATCGTGGCCG AGACGGGCCT GAACGCGCGC CTCGTGCAGG AGATGCTGGC GACCCTGTGT
GCGGCGGGCT TCGTCGACTA CGCACCGGAG GCCGGCACCT ACGACCTTCA AGAGGAAGCC
GCCGCCTGCA TCGCCGACGA GCAAGACGCG CACTTCCTCG GCGGCTGGAG TCAGATCCTG
CCCGCCCTCT ACCGCGTGAT CCCGGCGCTG GTCGAGGCCT GTCGGACGGA CGGAGGCGTC
GCCTATCCGC TCTACGGCGC CGACCTGGTC GAGGGGATGG CGCGCACCAG CCGACCCGAG
GTGGAAGCCT GCCTGGTCGC CACCTGGTTG CCTGCGCTGC CGGGACTGCT CGACGCGTTG
CAGGCCGGCA TCGCGGTGGC CGAAATCGGC TGCGGCTGCG GTGACGCTAT CCTCACCATG
GCGCGCGCCT GGCCGCGCTC GAGCTTCGTC GGCTTCGACA CCGACAGCGA ATCGCTGGCG
CGCGCGCACG CCGCGGCCCG GGCCAGCGGG GTCGAAAACG CCCGCTTCGC GCGTATCGAG
CAGAGCGGCC GGCTCGGCGA CGCGGAGTTC GATTTCATGC TCGCGATCGA CGTGATCCAC
GATGTGGCGC ATCCGCGACA GGTGCTCGCG CGCGTGCGCG AGGCGCTGCG TCCCGGCGGG
CGCTTGCTGC TGCTCGAGCC CGACGCCGGC GATCGACTCG AGGACAACCT CCACCCGGGC
GGCGCGCTGC TGTACGCGAT GAGCACCATG CACTGCACGC CGATCTCGCT GGCCGAGGGC
GGCGAAGGCG TGGGCGCCGC GTGGGGCCCG CGCTCCGCCG AAGCCTGCTG CCGCGAAGCC
GGGTTTTCCC GCTTTCGCCG CCTCCCCATC GAGAACGCCT ACAACGCATT TTATGAGGTT
TCCTGA
 
Protein sequence
MSERYTQMIT GAAVMAVMAV ADRTGLLRWL AGRGPVTPSR IVAETGLNAR LVQEMLATLC 
AAGFVDYAPE AGTYDLQEEA AACIADEQDA HFLGGWSQIL PALYRVIPAL VEACRTDGGV
AYPLYGADLV EGMARTSRPE VEACLVATWL PALPGLLDAL QAGIAVAEIG CGCGDAILTM
ARAWPRSSFV GFDTDSESLA RAHAAARASG VENARFARIE QSGRLGDAEF DFMLAIDVIH
DVAHPRQVLA RVREALRPGG RLLLLEPDAG DRLEDNLHPG GALLYAMSTM HCTPISLAEG
GEGVGAAWGP RSAEACCREA GFSRFRRLPI ENAYNAFYEV S