| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1286 |
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| Symbol | |
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| ID | 8543668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 1692447 |
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| End bp | 1694930 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386002 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003265737 |
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| Protein GI | 262194528 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.19653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00243826 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAAAG CCAAAAAGGC GGCCAAGAAG TCGGCCAAGA AGTCGGACAC GAAGGCTGCC
AAGAAGTCGG ACACGAAGTC GGACACGAAG TCGGTAAAGA AGACCAAGTC GGAGCCGGCC
GGCGACGGCG ACGCACGGCA CAGCGCCGAC AGCCACGACT GGATCCGCGT GCACGGCGCG
CGCGTCAACA ACCTCCAGGA CGTGAGCATC GAGCTGCCCA AGCGCCGCCT GACCGTGTTC
ACGGGCGTCT CGGGCTCGGG CAAGAGCTCG CTGGTGTTCG GCACCATCGC GGCCGAGTCG
CAGCGGCTGA TCAACGAGAC CTACAGCGCC TTCGTGCAGG GCTTCATGCC GACCCTGGCG
CGGCCCGAGG TCGACGTGCT CGAGGGATTG ACCACCGCGA TCCTGGTCGA CCAGCAGCGC
ATGGGCTCGG ACCCGCGCTC CACGGTCGGC ACCGCCACCG ATGCCAACGC CATGCTGCGG
ATTCTCTTCA GCAGACTGGG CAAGCCGCAC GTGGGCTCGC CCAACGCGTT CTCCTTCAAT
GTCGCCTCGG TGCGCGCCAG CGGCGTGTTC TCGAGCGACC GCGGCGACGG CCAGGCGGTG
AAGAAGACCT TCACCCGCAC CGGCGGCATG TGCCCGCGCT GCGAGGGCCG GGGCAATGTC
TCGGACATCG ATCTCGCCCA GTTGTACGAC GACACCAAGT CGCTGGCCGA TGGTCCCTTT
ACCATCCCGG GCTACACGCC GGGCGGCTGG GCCGAGCGCC AGTACACCGA CAGCGGCTTT
TTCGATCCGA AGAAGCCGAT CCGCAAGTAC ACCAAGAAGG AGATGCACGA CTTTCTCCAC
AAGGATCCGG TCAAGATCAA GATGGGCGGC ATCAACCGCA CCTACATGGG CCTGCTGCTG
CGTTTACAGC AGTCGTTCCT GTCCAAGGAC CGCGAGTCGA TGCAGCCGCA TATCCGCGCC
TTTGTCGACC GCGCGGTCAC CTTTGGCGTC TGCCCCGAGT GCGAGGGCAC GCGTCTCAGC
GAGGCGGCGC GCTCGTCGAA GATCGCGGGC ATCAACATCG CCGACGCCTG CGCCATGGAG
ATCCGCGATC TCGCCGAGTG GGTGCGCGGC CTCGACGAGC CCTCGGTGGC GCCGCTGCTC
ACGGCCCTGG GGCATACGCT CGACTCCTTC GTCGAGATCG GCCTGGGATA CCTCTCGCTC
GATCGCCCCT CGGGCACGCT CTCGGGCGGC GAGGCCCAGC GCACCAAGAT GATCCGCCAC
CTGGGCTCGG CGCTCACCGA TATCACCTAC GTGTTCGACG AGCCCAGCAT CGGCCTGCAT
CCGCACGACA TCCAGCGCAT GAACGAGCTG CTGTTGCGGC TGCGCGACAA GGGCAACACC
GTGCTGGTGG TCGAGCACAA GCCGGAGATG ATCGCCATCG CCGACCACGT GGTCGATCTC
GGACCCGGCG CCGGCAGCGG CGGCGGCACC ATCTGCTTCG AGGGCAGCCT CGAGGAGCTG
CGTGCCAGCG GGACCATCAC CGGGCGCCAC CTGGACGACC GCGCCGCGCT CAAGCAGCAG
GTGCGCGAGG CCAGCGGCGC GCTCGAGATC CGCGGCGCCT CCACGCACAA CCTGCGCGGG
GTCGATGTCG ACATTCCGCT CGGCGTATTG TGCGTGGTCA CGGGCGTGGC CGGCTCCGGC
AAGAGCTCGC TGATCCACGG CTCCATCCCT GCGGGCGCCG AGGTCGTGGC TATCGATCAG
GACCCGATCC GAGGCTCGCG GCGCAGCAAC CCGGCGACCT ACACCGGCCT GCTCGACCCG
ATCCGCAAAG CCTTTGCCAA GGCCAACGGC GTCAAACCGG CGCTGTTCAG CGCCAACTCC
GAGGGCGCGT GTCCCAACTG CAACGGCCTC GGCGTCATCT ACACCGACCT GGCGATGATG
GCCGGCGTCG CCACCACCTG CGAGGAGTGC GAGGGCAAGC GCTTCGAGGT CTCGGTGCTC
GACCACAAGC TCGGCGGGCG CGACATCAGC GAGGTGTTGG CCATGTCGGT GAGCGAGGCG
GCCGCGTTCT TCGGCGAGGG CGAGGCGCGC ACGCCGGCGG CGCTCAAGGT TCTCGACCGC
TTGGTCGACG TCGGGCTGGG TTACATTCGT CTCGGGCAGC CGCTGCCGAC GCTCTCTGGC
GGCGAGCAGC AGCGCCTCAA GCTGGCGTCC CACATGGCCG AAAAAGGCGG CGTCTACGTG
CTCGATGAGC CGACCACGGG CCTGCACCTG GCCGACGTCG AGCAGCTCCT GGCTTTGCTC
GACCGACTGG TCGATGCCGG AAAGTCGGTC ATCGTCATCG AGCACCACCA GGCGGTGATG
GCGCACGCCG ACTGGATCAT CGACCTCGGC CCCGGTGCCG GCAGCGAGGG CGGCGAGATT
GTCTTCGAGG GCACGCCGGC CCAGCTCGTG GCTGCGCGCG CGACGCTCAC GGGCAAGCAT
CTCGCCGCGT ACATCGGCGC CTGA
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| Protein sequence | MSKAKKAAKK SAKKSDTKAA KKSDTKSDTK SVKKTKSEPA GDGDARHSAD SHDWIRVHGA
RVNNLQDVSI ELPKRRLTVF TGVSGSGKSS LVFGTIAAES QRLINETYSA FVQGFMPTLA
RPEVDVLEGL TTAILVDQQR MGSDPRSTVG TATDANAMLR ILFSRLGKPH VGSPNAFSFN
VASVRASGVF SSDRGDGQAV KKTFTRTGGM CPRCEGRGNV SDIDLAQLYD DTKSLADGPF
TIPGYTPGGW AERQYTDSGF FDPKKPIRKY TKKEMHDFLH KDPVKIKMGG INRTYMGLLL
RLQQSFLSKD RESMQPHIRA FVDRAVTFGV CPECEGTRLS EAARSSKIAG INIADACAME
IRDLAEWVRG LDEPSVAPLL TALGHTLDSF VEIGLGYLSL DRPSGTLSGG EAQRTKMIRH
LGSALTDITY VFDEPSIGLH PHDIQRMNEL LLRLRDKGNT VLVVEHKPEM IAIADHVVDL
GPGAGSGGGT ICFEGSLEEL RASGTITGRH LDDRAALKQQ VREASGALEI RGASTHNLRG
VDVDIPLGVL CVVTGVAGSG KSSLIHGSIP AGAEVVAIDQ DPIRGSRRSN PATYTGLLDP
IRKAFAKANG VKPALFSANS EGACPNCNGL GVIYTDLAMM AGVATTCEEC EGKRFEVSVL
DHKLGGRDIS EVLAMSVSEA AAFFGEGEAR TPAALKVLDR LVDVGLGYIR LGQPLPTLSG
GEQQRLKLAS HMAEKGGVYV LDEPTTGLHL ADVEQLLALL DRLVDAGKSV IVIEHHQAVM
AHADWIIDLG PGAGSEGGEI VFEGTPAQLV AARATLTGKH LAAYIGA
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