Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1274 |
Symbol | |
ID | 8543656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1679447 |
End bp | 1681051 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 646385992 |
Product | hypothetical protein |
Protein accession | YP_003265727 |
Protein GI | 262194518 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000455544 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000267355 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCAGTT TCGACGACAG ATCGCGACAG CGCTCGGACC ACGCGGCCGA CCTGCAACCG GTGCAAAAAG CCGAGCCCAA GGCGCCGGGC AAACGGGCCA CCAGCGCCGG CCTGACGCCG GGCGCGCCCG CTGCGCCCGC GCCCGCTGCG CCCGCGCAGC GCAAGGCCGA TCCCGCGGCG CAGGCCCTGC AAATGCAGCG CGAGACCATG ATCCAGCGCT GGACCCAGAC CGCCATGCGG CCCGACCTGC ACCCCGCCCC GGTGCAGCGC GTAGCGGCGA CGAGTGCGCC GGAGGAGGGC TTGCCGTCCG ACGGTGCCGG TCGCGCCATG CCGGCCGCGG TCCAGGCCAA GATGGAAAAC GCATTCTCCG CGGACTTCTC GTCGGTACAG CTCTACGAGG GTTCGCGCGC CGAAGCGCTG GGCGCGCGCG CGTATACCCA GGGCTCGGAT ATCCATTTTG CTCCGGGCGC CTACCAGCCG GATTCGCACT CGGGCCAGGA GCTGCTCGGG CACGAGCTGG CCCACGTGGT GCAACAGTCC CAGGGGCGCG TAAACCCGAC CACGCAGCTC AAAGGCGTGG GCGTGAACGA CGACTCGGCG CTGGAGCGCG AGGCCGATGA GATGGGCGCC AAGGCCGCGC GCGGCCAGCC GGCCAGCGGC GCGAGCGCGT CGGCCACAGG CGCAGCCGCG GGCGGCGCCG CGGGCGTGCA GATGAAGCGC TCGCCGCTGA GCCCCCAAGG CGGCCAGACC GTGCAGCGCG AGGTCGACAC CGCCACCCAG GGCAAGGGCA GCAACAAGCG CACGGTATAC TTCTCGACGC TCGACCCCAA CCCGTTCCGA CCCAAGATGT TCTCGACCCG TGAAGAGGCC GAAGCGCACG ACCGCGAGCT CGAGTCGCAA CAAAAACAGG CGGCGAAGAA GCCCGAGCCC GAGGTCTCCG CGATTCAGGT GGTCGAGCCC AAGGTCGACG AGTCCGAGGT CGTCGAGCCC AAGGACTCGG GGATTCAGAT CATCGAGTCC GCGCCCAAGC CCAAGGCCAA GCCCAAGGCC GAGCCGGTCT CGGGCTTGAC GCTGTCCCAG ATGAACAGGA CCTGGGAGCA AGCTCTCGCG CGCAAGCAGG AAGAAGTCAT CGCCGCCATG CAGCAGTTCG TGCCCGACTT CACCGCGCTG GCCGCGGATG CCGAGGTCCG CATCCGCGGC AGCCTGGCGA GCGGTGTCAA AGGGCCCAAC AAGACCAGCA AGACCAACGA GCGGCTGCTC TTCGATCCCA CCGACTTCGA CATCGACGCC TACGTGGAGA GCGATACGCT CTACGGCGAG GCGCTGAAGG CCGACAAGAC CAGCGATGAG GTCGTGCGCG GCCAGATCGC GGGCTCACGC CACCCCAAGG TGAACGAGAT CATCCGTCGC ATGCGAACCG AGCTGGCCAA GGTGACCGGC AACCGCGACG CGCCGCCGGA GAGCCAGTAC AAGTTCAACG TGCTCATCCG CTCGTCGCGA AATGCCAGTT TCAAAACCTA CCAGGATCGC AAAGCCATGA GCGATCTCGG CGAGAATCCC AACTACGGCA ACCCCTTGAA TGTACCGCCC CCAGACGACA AATAA
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Protein sequence | MSSFDDRSRQ RSDHAADLQP VQKAEPKAPG KRATSAGLTP GAPAAPAPAA PAQRKADPAA QALQMQRETM IQRWTQTAMR PDLHPAPVQR VAATSAPEEG LPSDGAGRAM PAAVQAKMEN AFSADFSSVQ LYEGSRAEAL GARAYTQGSD IHFAPGAYQP DSHSGQELLG HELAHVVQQS QGRVNPTTQL KGVGVNDDSA LEREADEMGA KAARGQPASG ASASATGAAA GGAAGVQMKR SPLSPQGGQT VQREVDTATQ GKGSNKRTVY FSTLDPNPFR PKMFSTREEA EAHDRELESQ QKQAAKKPEP EVSAIQVVEP KVDESEVVEP KDSGIQIIES APKPKAKPKA EPVSGLTLSQ MNRTWEQALA RKQEEVIAAM QQFVPDFTAL AADAEVRIRG SLASGVKGPN KTSKTNERLL FDPTDFDIDA YVESDTLYGE ALKADKTSDE VVRGQIAGSR HPKVNEIIRR MRTELAKVTG NRDAPPESQY KFNVLIRSSR NASFKTYQDR KAMSDLGENP NYGNPLNVPP PDDK
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