Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1272 |
Symbol | |
ID | 8543654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 1675460 |
End bp | 1679032 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646385990 |
Product | serine/threonine protein kinase with WD40 repeats |
Protein accession | YP_003265725 |
Protein GI | 262194516 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000159501 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCTCCG ACGCTGAGCG CTCGGCCGCG CTCTCCGAGC CGGGTAGCCA CGACACCGTC AATCTCGCGG TCGGGGATCA GGCGCAGCCC CCGGCGTCCG AGTCCGGCGA GGCGATGCAG ACCGCGTGCG ACGCGGCGAT CGCCGAGACC CTGGTCGTCT CCCCGGTGGC GGATGCGCCT GTGCCGGGCC GGGACGCGCA ACCGGCCAGT TCGCAGGCGC GCGCGCCCGG CGACGCGTGC GACACCAGGG ACGAGCGTTC GGTGGCCGCG CGTTCGCGTC CCGAGGTGCA GACGGCCAAG GGCGAGCGCA TCGGTCAATA CGAGTTCATC CGCTCGCTCG GCCACGGCGG CATGGGCGAG GTCTTTCTCG CCCGCGATCT GCGCCTGGGC CGCCTGGTCG CGATCAAACG CCTGCACACG CCCGGCCCCG CTCTGGCCGC GCGCTTCTTG CGCGAGGCCC GCACCACGGC CCGGTGCACG CACGAGAACA TCGTCGTCAT CCACGAGGTC GGCGAGGTCG GCGGCGCTGG CGGCGAGCCG TACATGGTGC TCGAGTATCT CGAGGGCCAG ACCCTGCGCG CGTGGCTGCG CGCCCGCGAG ACCGGCGCGG GCCAACGCGA GCCGGTCTCG CCGACCCGCG CCGTGGAGCT GATGCTGCCG GTGGTGCGCG CGCTGGCCTA CGCGCACCAG CGCGGCATCG TGCATCGCGA CCTCAAGCCG GAGAACGTCA TGCTCACGCG CGCCGGGGGG GTCAAGGTGC TCGACTTCGG CATCGCCAAG CGGGTGCCGA TCGCGGCCAC GTCCACGACC GAGCAGCCCA CCGGCGACAG CTTCGTGAGC GGCGTCGTCG ATATCTCCTC GGGCTTGGTC ATCGGCCCGG CGAATTACCT CAGCAGCGGG ATCGTGGGCA CGCTGCCGTA CATGTCGCCC GAGCAGATGA ACGCCGGCGA GATCGACCAT CGCAGCGACA TCTGGGCGGT GGGCATCATG CTGTTCGAGC TGGTGGCTGG CCGCCATCCC GTACACCCGG TCACCCACAC GGCGCTTCTG CGCGTGGCCG ACGAGCACGC GCGGGTGCCG AGCGTGCTCG AGGTGGTGCC CGGGCGCGCG GCCGAGCTGG GCGCGCTCGC CGGTATCATC GACCGCTGTC TGCTCAAGCT CCCGTCGCAC CGCACGCCGC ACGCGCGCGC CCTGCTGGCC GAGCTCGAGG CGCTGGTGCC CGAGCGCCAC AGCGCGCGCG TCGGCGACGA CGGCAACCCC TTCGCCGGTC TGGCCGCGTT TCAAGAGCAC GACGCCGACC GGTTTTTCGG ACGCGAGCGC GATATCGACC AGGTGGTCGG CGAGCTGCGC AGCCGGCCGC TGGTGGCCCT GGTCGGCCCC TCGGGGGCGG GCAAGTCGTC GCTGGTGCGC GCCGGCGTCA TCCCAGCGCT CAAGCGCTCG GGCGAGGGCT GGAGCGCGTA CGTGGTGCGG CCTGGTCGCG AACCGCTCAC GGCGCTGGCC GCGATGCTGC AGACGACCAT CGAGGACGAC CACGGCGCCG GCCAGGCGTC CGCCGGTCCG GACGAGCTGC TCATGGACAG CGCCTCGAAC GCGGTGCTCG GCCCGCTGGT CGAGCGGATC CGCGCTGAGC CCGGCTACCT GGGGGCCCGT TTGCGCATGC GCGCCGGCAG CAAGCTGCGG CGGCTGGTGA TCTTCGTCGA TCAGCTCGAG GAGCTCTACA CCCTGGGCGC GCCCGCGGCG GAGCGCACCG CGTTTTTGGC CAGCCTGGCG GCCGCGGCCG ACGACGCGAC CTCGCCGCTG CGCGTGCTGG TGTCCATGCG CTCGGACTTT CTCGACCGAC TGACCGAAGA CCGCCGCCTG GGTCGCGAGG TCACGCGCGG CCTGCTGCTG CTGCCGCCGA TGGCGCGCGA GGGTATGCGC CGGGCGCTGC TGGGGCCGCT CGAGGCCGCC GACTACCGCT TCGAGTCGCC CGCGCTGCTT GAGCGCATGA TCGACTCCCT GGCCCAGACC CCGGGCGCGC TGCCGCTCTT GCAGTTCACG GCCGCGCGGC TGTGGGAGCT GCGCGACAGC GACCGGCGCA TGCTCACGGA GGCCAGCTAC GAGCGCATCG GTGGCGTCGC CGGCGCTCTG GCCACACATG CCGACGCGGT GCTCGGCGGC CTGTCGTACG TGCGCCAGGC CGTGGCCCGG GCGGTGTTCG AGCGCCTGGT CACGCCCGAG CGCACCCGCG CGCTGGTGAG CATCGCCGAG CTGCAGACCT GCGGCGGCGA TGTCGACACC GTGGACGAAA TCGTCCAGCA CCTGGCCGCG ATGCGCCTGC TGGTCATCGA GCGCGGCCAG CAGGCCGACG CGAGCGCGGT CGAGCTGGCG CACGAGTCGC TGATCGACCG CTGGCCCACG CTGGCGAGCT GGCTCGACGA GAATGAGGAA GACACGGCGC TGTTGGCGCG GCTGCGCGGC GCGGCCCGAG ACTGGGAGCG CAGCGGCGGC GCGAGCGGCC TGCTGTGGAG CGGCGCGGTC GCGCTCGAGG CCTGGGCCTG GCAGCAGCGC TATTCGGGCC CGCTGGCGCC CGCCGAGCGG CGCTTCCTGG CCGCCGTGTA CGCGGGCGCC ATGCGCACGC GGCGCACGCG GCGCTATCTG GCGGCGGCGC TGGTGTGCAT CAGCGCGCTG CTCGCCGTGG CCATGGGCTG GCTGGCCTGG AATCAGACGG TCGCGCGCCG CGAGACCGCT GCGCTCGCCC GCCAGGCCGC CGAGGAGGCC GCGCGCGCGC GCGACGCCAC GCGCATGTCG GCCCTGCGCA CGATCCCCGA GGACCCGACC ACGCAGCTCG CCCTGCTGCG CGAGATCGAA GACGCCGCCT CGCCGCCGCC GGGCACGCTG CAGGAAGCCA CGCGTCTCTT GCACAGCAAC GTCGCGCCCG TGGTCTTCAC CGAGCACGAG GACGCGGTCT GGTCGGCGAG CTTCAGCCCC GACGGCGCCC GCGTGGCCTC GGCTTCGTAC GATCGGACGA TTTTGCTGTG GAGCGCCGAC GGCGTCGGCG CGCCCACCGT GCTGCGCGGC CACGAAGACG CGGTGCTTTC AGTCAATTTC AGCCCCGATG GAACCCGCCT CGCGTCGGCC TCCAAGGACG GCAGCGTGCG GGTGTGGAAC ACCGACGGCG CGGGCGCGTC GCGCATCGCG GGCAAGCACG AGGCCGGCAC GAACTCGGCG AGCTTCAGTC CCGACGGCAG CCGCGTGGTC TCCGCTGCGC AAGACGCCAC GGTGCGGGTG TGGAACGCCG ACGGCAGCGG TGAGCCCGTC GTCCTGAGGA ACCACGGGGA CTGGGACACG CAAGCGCGTT TCAGCCCGGA CGGGCGGCGC CTGGTGACGG CCGCCGATGA TGGCACGGTG CGCGTGTGGG ACGAGCTCAC GCCGGTGGCG GCCGACGACC CGCGGCTGTG GCTGCTCACT ACCTACTGCA TGCCGGTCGC GCGCCGCGTG GAGCTGCTCG GCGTGGACGA GACCAGCGCC CGCGAGCACC GCGCCCGTTG CCTCGAGCGC GTGAAGCGCG CCCGCCGGGG CCGAGCGCTG TAG
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Protein sequence | MSSDAERSAA LSEPGSHDTV NLAVGDQAQP PASESGEAMQ TACDAAIAET LVVSPVADAP VPGRDAQPAS SQARAPGDAC DTRDERSVAA RSRPEVQTAK GERIGQYEFI RSLGHGGMGE VFLARDLRLG RLVAIKRLHT PGPALAARFL REARTTARCT HENIVVIHEV GEVGGAGGEP YMVLEYLEGQ TLRAWLRARE TGAGQREPVS PTRAVELMLP VVRALAYAHQ RGIVHRDLKP ENVMLTRAGG VKVLDFGIAK RVPIAATSTT EQPTGDSFVS GVVDISSGLV IGPANYLSSG IVGTLPYMSP EQMNAGEIDH RSDIWAVGIM LFELVAGRHP VHPVTHTALL RVADEHARVP SVLEVVPGRA AELGALAGII DRCLLKLPSH RTPHARALLA ELEALVPERH SARVGDDGNP FAGLAAFQEH DADRFFGRER DIDQVVGELR SRPLVALVGP SGAGKSSLVR AGVIPALKRS GEGWSAYVVR PGREPLTALA AMLQTTIEDD HGAGQASAGP DELLMDSASN AVLGPLVERI RAEPGYLGAR LRMRAGSKLR RLVIFVDQLE ELYTLGAPAA ERTAFLASLA AAADDATSPL RVLVSMRSDF LDRLTEDRRL GREVTRGLLL LPPMAREGMR RALLGPLEAA DYRFESPALL ERMIDSLAQT PGALPLLQFT AARLWELRDS DRRMLTEASY ERIGGVAGAL ATHADAVLGG LSYVRQAVAR AVFERLVTPE RTRALVSIAE LQTCGGDVDT VDEIVQHLAA MRLLVIERGQ QADASAVELA HESLIDRWPT LASWLDENEE DTALLARLRG AARDWERSGG ASGLLWSGAV ALEAWAWQQR YSGPLAPAER RFLAAVYAGA MRTRRTRRYL AAALVCISAL LAVAMGWLAW NQTVARRETA ALARQAAEEA ARARDATRMS ALRTIPEDPT TQLALLREIE DAASPPPGTL QEATRLLHSN VAPVVFTEHE DAVWSASFSP DGARVASASY DRTILLWSAD GVGAPTVLRG HEDAVLSVNF SPDGTRLASA SKDGSVRVWN TDGAGASRIA GKHEAGTNSA SFSPDGSRVV SAAQDATVRV WNADGSGEPV VLRNHGDWDT QARFSPDGRR LVTAADDGTV RVWDELTPVA ADDPRLWLLT TYCMPVARRV ELLGVDETSA REHRARCLER VKRARRGRAL
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