| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1250 |
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| Symbol | |
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| ID | 8543632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1641481 |
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| End bp | 1643415 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646385968 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003265703 |
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| Protein GI | 262194494 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCC CGATCTCCAT TCGTTCCTTT GCCAGGCGCC CCGGACTGCT CATTGTCCAG
ACAGCCCTGC TCGCGGCCGG CCTCGCGGCC TGCACCGATA TCGCACCGGA AGCCGGCAAC
AGCGGCGACA AGACCCAGCA CACCGCTCAG GATGAGCGCG CGCTAGCATC AACTGCGCTG
TATCAAGATC CCGCGGCGGC GATTCCCGAT CGCGTGGCCG ACCTGCTGGC GCGCATGAGC
CTCGACGAGA AGATCGGACA GATGACCCAG GTCGAGCGCT CGTCGCTGCA ATCCGATCAG
GATCTCGCCG CCTATCATAT TGGCTCGCTG CTCAGCGGCG GCGGTTCGGC GCCGGCGTCG
AACACACCGA GCGCGTGGGC CGACATGGTC GACGGCTATC AGAGCGTCTC CATGAGCACG
CCGCTGGGCA TTCCTCTGCT GTACGGAATC GACGCCGTCC ACGGCCACAA CAACGTCGTC
GGCGCGACCA TCTTCCCGCA CAACATCGGA CTCGGCGCCT CGCGCAATCC CGCGCTCGCC
GAGGAGATCG GCCGCATCAC GGCCAAAGAG GTGTACGCCA CCGGCATCCG CTGGGACTTC
GCGCCCACGC TGTGCGTCGG CCGTGACGAG CGCTGGGGCC GCACCTATGA GTGCTTCGGC
GAGCATCCCG AGGTGCCGGC GATGATGAGC TCGTTCATCG ACGGCTTGCA GGGCACGTAC
AGCGGCGGCG CCGGTCTGTC GGGACGCAAC GGCGTGCTGG CCACGGCCAA GCACTGGGTC
GGCGACGGCG GCACGAGCTG GGGCACCGGC GAGGGTTCCT ACCAGATCGA CCAGGGCGAC
ACCCAGGTGA GCGAGGCCGA GCTGCGCGAC GTGCACATCG CGCCCTATCA CGACGCCATC
GCGCGCAACG TCGGCAGCGT CATGCCCTCG TACTCGAGCT GGAACGGCGA GAAAATGCAC
GGCCACGCGT ATCTCATGGG CGACGTGCTG CGCGACGAGA TGGGCTTCGA CGGCTTCGTT
ATTTCGGACT GGCAGGCCAT CGACCAGATC CCGGGCGACT ACGCCAGCGA CGTGCGCACA
TCGATCAACG CCGGCGTCGA CATGGTCATG GTGCCGCACG ATTACATCAC CTTCCAGAAC
ACGCTGCGCA ACGAGGTCAA CGCCGGCAAC GTGTCGCTGG CCCGCATCGA CGAGGCCGTG
AGCCGCATCC TCACCAAGAA GTTCGAGCTC GGCCTGTTCG AGCAGCCGTA TTCTGACCGC
ACGCACCTCG CCGAGCTCGG CTCGGCCGCT CACCGCGAGG TGGCGCGCCG CGCGGTGCGC
GAGTCGCTGG TGCTGCTCAA GAACGACGGC ACCCTGCCGC TGGCCAAGGA TCCGCAGAAA
ATCCTGGTCG CGGGCAAAAG CGCCGATGAT ATCGGCCTGC AATCGGGCGG CTGGACGATC
TCGTGGCAGG GTGCGGCCGG CGACATCACG CCGGGAACCA CGGTCCTCGA GGCGGTGCGC
GCCACGGTCG CGCCGTCCAC CACGGTCGAG TTCAAGCAGC GCCCCAACGG CCGCCTGAGC
GGCGATGTCG GCATCGTCGT GGTCGGCGAG ACGCCCTACG CCGAGGGCCG CGGCGACAAC
AACAGCCTCA GCCTGGCGGT GGAAGACCGC AACGCCATCA AGAACGTGTG CGGCGCCATG
CCGTGTGTGG TGGTGCTGAT CTCGGGTCGG CCGATGATGC TCGAGGGCGA GCTGGACAAG
ATCGACGCGC TGGTGGCCGC GTGGCTGCCG GGCACCGAGG GCCAGGGCGT CGCCGATGTG
CTGTTCGGCG ACTTCGACTT CAGCGGCACG CTGCCGCTGT CGTGGCCGCG CACCATCAAC
CAGGTGCCGA TCAACGTCGG CGATGCCTCC TACGACCCGC TCTTCGCCTA CGGCTTCGGC
CTCAGCTATC AGTAG
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| Protein sequence | MTLPISIRSF ARRPGLLIVQ TALLAAGLAA CTDIAPEAGN SGDKTQHTAQ DERALASTAL
YQDPAAAIPD RVADLLARMS LDEKIGQMTQ VERSSLQSDQ DLAAYHIGSL LSGGGSAPAS
NTPSAWADMV DGYQSVSMST PLGIPLLYGI DAVHGHNNVV GATIFPHNIG LGASRNPALA
EEIGRITAKE VYATGIRWDF APTLCVGRDE RWGRTYECFG EHPEVPAMMS SFIDGLQGTY
SGGAGLSGRN GVLATAKHWV GDGGTSWGTG EGSYQIDQGD TQVSEAELRD VHIAPYHDAI
ARNVGSVMPS YSSWNGEKMH GHAYLMGDVL RDEMGFDGFV ISDWQAIDQI PGDYASDVRT
SINAGVDMVM VPHDYITFQN TLRNEVNAGN VSLARIDEAV SRILTKKFEL GLFEQPYSDR
THLAELGSAA HREVARRAVR ESLVLLKNDG TLPLAKDPQK ILVAGKSADD IGLQSGGWTI
SWQGAAGDIT PGTTVLEAVR ATVAPSTTVE FKQRPNGRLS GDVGIVVVGE TPYAEGRGDN
NSLSLAVEDR NAIKNVCGAM PCVVVLISGR PMMLEGELDK IDALVAAWLP GTEGQGVADV
LFGDFDFSGT LPLSWPRTIN QVPINVGDAS YDPLFAYGFG LSYQ
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