Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1040 |
Symbol | |
ID | 8543422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 1327385 |
End bp | 1330087 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646385792 |
Product | protein of unknown function DUF450 |
Protein accession | YP_003265527 |
Protein GI | 262194318 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0444477 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATGAAA TTGACCAGGG GCACGAAGCG CTCAACGGCA TTACCCGAAC CTGGGGCCAA CTCAGTCTCG CTCAGGCGAA CGAGGCCGAA ACCCGCCTCA AAGTAATCGA CGAGGTTCTG TTTAATGTAC TCGGTTGGTC AAAAGACGAT GTGAGCGTCG AAGAGAGGGT GTCGGAAGAT GGGGAAACTA CTTTTGCGGA CTACATAATA CGTACAGCTA CGGTGCAGGT TCTTGTTGAG GCGAAGAAAG TTGGAGTCGC CTTCGAACTG CCGACGACGC GAAAGGCGCT GCGCCTGGGT GGGGTGCTGA GCGAAGGCGA AGTCGGCGAT GCTATAAGGC AAGCTCGTGA CTATTGCCGC AAAAAATCGA TTCCTTTTGC CGCCGTAACC AACGGCAATA CTTGGGTCAT CTTTCCCGCC GTTCGCACAG ATGGAATAGA GTTTGAGAAG AGTGACGCTC ACACATTCAG TTCACTCGCA ATTGTCTCAG AACGATTCGT GCAATTCTGG GAATTGCTCT CAAGGCAGCG GGTCCTAGAA GGGAGTCTCA CTAGTGAGTT ACTCGGCAGC GAGGACCAGA ACCGCCTTCG TCGCTGCGTT CGAGAACTCC ATAGGGAGCC GGGCTTCCGG CTCGGGCGAA ACGCCCTTCA CAGCTATCTC GAGCCGGCAA TTCATCAGGC GTTGACTGAT GAAGCAATCC TCAGAGACCG TGATGCACTT GAAGCCTGCT ACGTTAAGAC TAGCAATCGC GTCAAATACG ACACGCGTCT GCGTGTATTT TTCGGACACG GGAGGGCACC ACTGGGTCAC GCGCCAACGC GGCTAGGCAA CAAAGGCCGG GGAAAATTCA CAACCGCTGT CACGAAGACT GTAACTGATA CCCCCCCTAG ATTCGTCGTT CTTCTCGGAA AGGTAGGGGC CGGCAAGACC ACATTTCTTC ATTACACCCG GCTAGTGTCT GCCGTGGACG CCATTGAAGG AAAAGTGTTG TGGCTTTATA TTGATTTCAA GGCTGCGACC AAGGCAGACC GTCCGAGAGA TTTCATCTAT CGTATGTTGC TTGAGCTTAT AGAGAGCGAC GAGCAGTTCG AACTTGGTGA CTGGGAGCAC TCCGTGCGCC CCGCTTACCG CGATGAAATC GAGAAGCTAA AACGGGGTCC GCTGAATCCA CTGTTTCGAC AGAAACCAGA TGAGTTTGAG CTCAAAATTG CAGAGCAAAT CACGCGAGAG CGCGACGAGG GAAAACCCTA CGTGGACCGA GTCCTTCGAA ATGCAGCTTC GCGTTTGCCA GGTTTCCTCA TCCTCGATAA TCTTGACCAG ATCGAGGACG ATGACTTCCA GGGCCAAGTT TTCCTGGAAG CCCAGGCACT TGCTCGTATT GTTGGCTTTA ACGTTATCGT TTCGATGCGA GAGTCAACTT ATCTGCGCCA CAAAGAAAGC CCTGCATTCG ATGCCTTTCA ATTTGATTCC TTCTACCTGG ATGCGCCGAG CATTCTCCCC GTGCTGTCGC ACAGATTGGC TTACGCCAAG CGTTTGCTGA GCGGTCCTGC CAAGATCCAG ACAGAAAAAG GCATGACGGT TTCCGTTGAC GATCTTGGCG TGTTTTTCGA GATTGTTTCG TCGTCGTTAC TCTCGGACGA GAGCGGGCAG CTACTCGAGT CTTTAGCAGG TGGCAATGTG CGTCGTGGCC TCGAACTCGT ACGAGACTTT CTAGCCAGCG GGCACACGAA CGCCGACCGA GCCTTGATGG CCTATGTGAA GAGGGGGGGC TACGTATTTC CAACACACGA GGTTCTTCGC GGTTGCATCC TCGGGCCCCA GAAATACTTC GATGAGCGTT ACTCAAACGT TCCAAATATC TACGATGCGA AGACCGGTAA CCGCGCGTCG CAGATGCTGA GGCTACGGAT CGTTCAACTC CTCGTAGAAC ATGCCTCTCT TCCAGGGTTC GAAGGTGTCG CTACGACGGA AATCGAAAAC GCGGCAAGCC AACTCGGGGT GGCACATCAA CTTGTCCGCA ACTGTCTTTG CTGGCTGGTT GAAAAGGGTG TGATTCAGAC ATCTGATGGT CTATCGCCGT CGGATCAAAA CAGCCTTCTG CCAACGCGAT TTGGCGCGTT TCTCCTGAGG GTATTATGTA AGCAGTTTGC GTATACCGAA TTTTGTACAT TCGATTCCAT TATATATGAC GACGATGCTT GGCAAGATCT CAAGGACCTT ACCTCTGAGA TCGAGAACGA GGGAGATATC GTAGCGCGAG TAGAATTACG AGCGGAGCGA GCCGACCGCT TTCTCGAGTA CTGCGAACGC ACGGAAGAAC TGTTGACCGT GGAAGCTAGG CGGCGAGCGC TGCCCGAGGA CTACGCGCAG CAGCTTGTGC CAGATCTCCG GAAGAAAGTC GGCGACGATG CCGTCAAGGC GCTGAGTTCA GCTAGGAGGC GATATGGTTC TCTCGACAAT GATGCCGTAG GCAGTCGAGC AAGGCCGATC GCCTCCGCTT GCAACACGGG AAAAATTGCT AACAGCTGGT TGGACCGCGA CTATGTCTTT ATAACGGACG AGTCTGGTCG AGACTGGTTC AGCCATCGGT CGGACTTTCT TAGCCAGGAC GAGTGGAACA AGCGGCAGAC AGGTAAGCCA TGTGAGTTCC TCGCTGGCGA GTGGCGCGGG AAGCCCCGTG CTACTCAAGT AAAGGTGTTC TAG
|
Protein sequence | MHEIDQGHEA LNGITRTWGQ LSLAQANEAE TRLKVIDEVL FNVLGWSKDD VSVEERVSED GETTFADYII RTATVQVLVE AKKVGVAFEL PTTRKALRLG GVLSEGEVGD AIRQARDYCR KKSIPFAAVT NGNTWVIFPA VRTDGIEFEK SDAHTFSSLA IVSERFVQFW ELLSRQRVLE GSLTSELLGS EDQNRLRRCV RELHREPGFR LGRNALHSYL EPAIHQALTD EAILRDRDAL EACYVKTSNR VKYDTRLRVF FGHGRAPLGH APTRLGNKGR GKFTTAVTKT VTDTPPRFVV LLGKVGAGKT TFLHYTRLVS AVDAIEGKVL WLYIDFKAAT KADRPRDFIY RMLLELIESD EQFELGDWEH SVRPAYRDEI EKLKRGPLNP LFRQKPDEFE LKIAEQITRE RDEGKPYVDR VLRNAASRLP GFLILDNLDQ IEDDDFQGQV FLEAQALARI VGFNVIVSMR ESTYLRHKES PAFDAFQFDS FYLDAPSILP VLSHRLAYAK RLLSGPAKIQ TEKGMTVSVD DLGVFFEIVS SSLLSDESGQ LLESLAGGNV RRGLELVRDF LASGHTNADR ALMAYVKRGG YVFPTHEVLR GCILGPQKYF DERYSNVPNI YDAKTGNRAS QMLRLRIVQL LVEHASLPGF EGVATTEIEN AASQLGVAHQ LVRNCLCWLV EKGVIQTSDG LSPSDQNSLL PTRFGAFLLR VLCKQFAYTE FCTFDSIIYD DDAWQDLKDL TSEIENEGDI VARVELRAER ADRFLEYCER TEELLTVEAR RRALPEDYAQ QLVPDLRKKV GDDAVKALSS ARRRYGSLDN DAVGSRARPI ASACNTGKIA NSWLDRDYVF ITDESGRDWF SHRSDFLSQD EWNKRQTGKP CEFLAGEWRG KPRATQVKVF
|
| |