Gene Hoch_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0954 
Symbol 
ID8543336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1219525 
End bp1220493 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content53% 
IMG OID646385715 
Producthypothetical protein 
Protein accessionYP_003265450 
Protein GI262194241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.791563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATATA TGCTTTACGA CCTCCGCCCG GGTCAATTCG AAAATTTGGT GGTCGAGTTA 
TGCCACGAGT TGCTGGGGGC GGGCGTGCAG AACTTCGCTA CCGGGCCGGA CGGTGGGCGA
GACGCGAAAT TTTGTGGAAC CGCACAAAAT TACCCTAGTC AAGCTGAACC TTTGGTTGGC
ACGACTATCG TCCAGGCCAA GCATACCAGC GATGTGGTTG GCCGCTTCTC CGATGGAGAC
TTCGGCGGCG CATCCGCGAC TTCCACCATC TCCGAGGAAA TTCCTCGCAT TAGGGCGCTT
CGTGAAGCAG ACCAACTTGA TCACTATATC CTCTTCGCTA ACAGGCGGCT TGGGGGGAAC
ACGGACGAGC GGATCAAGGG GCGCTTGATT GCGGAAACTG GCGTTTCGTC CGTGTATCTG
ATTGGTGTGG AGCAGATCGA GCGCTACATA AAACGATATG ATTATATCGC GACTACTCTA
CGTGGGTTCG AGCACGACCT TCCCCTTCGG GCGTCACCCG ATGATCTCGC TGAGGTGATC
ACCGCAATTG CTGCTGTGCA ATCAGATATT GATTGGCCAG CGACGCCCTC TGCTTCGTCA
CTTCAACGAG TTGCTTTTAA AAAGAAGAAT GAGATCAACG GGTTGAGTGG TGAATTCGCT
CGCTATATCA CTCGTAACTA CCTGAAGCAT TTCGATGTCG TCGAGGCGTT CCTAGCCGAT
CCGATCAACG TACATGCCCA TAAGGCGTAC CTTGACGCGG TGGATGAATT TGCAGGGAAG
CTAATTGCGT ACCGAGGAAA CTTTGAGACT TACGATAAGC TTCTGGACTA CTTGGTCAAC
CGTCTCATCG AGAGAGATGG CGACTTGAGA GCCCAAAAAC GGCTTACTCG GACCGTATTC
TACTTTATGT ACTGGGCTTG CGATATTGGT GCGACGGAGG AGGAAATCGG TGATGCTCCG
CCCGAATAA
 
Protein sequence
MRYMLYDLRP GQFENLVVEL CHELLGAGVQ NFATGPDGGR DAKFCGTAQN YPSQAEPLVG 
TTIVQAKHTS DVVGRFSDGD FGGASATSTI SEEIPRIRAL READQLDHYI LFANRRLGGN
TDERIKGRLI AETGVSSVYL IGVEQIERYI KRYDYIATTL RGFEHDLPLR ASPDDLAEVI
TAIAAVQSDI DWPATPSASS LQRVAFKKKN EINGLSGEFA RYITRNYLKH FDVVEAFLAD
PINVHAHKAY LDAVDEFAGK LIAYRGNFET YDKLLDYLVN RLIERDGDLR AQKRLTRTVF
YFMYWACDIG ATEEEIGDAP PE