| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0552 |
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| Symbol | |
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| ID | 8542932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 744882 |
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| End bp | 745562 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646385346 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003265083 |
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| Protein GI | 262193874 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.496663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGC ACAAGATCCT GATCGTCGAA GACGATGAAG CCATCGCCGC GGGCCTGGCC
CTCAATCTCA AGATCGCCGG CTACCAGACC ACGGTGGTCC ACGACGGCCT GGAGGCGCTC
AAACGGCTCG AGGAGTCGTC GCCGCACCTG ATCTTGCTCG ATATCAATCT GCCCAGCGAG
AACGGAATCG GCGTGCTCGG GACGCTGCGC CAGAGCGGCA ACCAGGTGCC CGTGATCATC
CTGTCGGCGC GCGACGACGA GTACGACAAG GTCGCCGCCC TGCGGCTCGG CGCCGACGAC
TACATCACCA AGCCCTTCGG CCTGGCCGAG CTCATGGCCC GGGTGGCCGC GGTGCTGCGT
CGCGTGGGCA CGCAGGAGAT CAGCGCGCTG CACCGCTTCG GCAGCGTCGA GGTCGAGCTC
GAGACCCGCA GCGTGGTCCG CCAGGGCGAG GCCATCAAGC TCACGCACCT CGAGTTCGAG
CTGCTGGCCT TCCTGGTCAA GAACCCGTCG CGCGTGTTCT CGCGCGAGGA GCTGCTGCGC
CAGGTGTGGA AGCAGTCCTC GGGCACGCTG CGCACAGTCG ATAACTTCGT CGCCCAGCTC
CGCAGCAAGC TCGAGAGCGA CCCGGAAAAT CCGCGCTTTT TCATCACCGT GCGCGGCAGC
GGCTACCGCT TCGATAGCTG A
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| Protein sequence | MSQHKILIVE DDEAIAAGLA LNLKIAGYQT TVVHDGLEAL KRLEESSPHL ILLDINLPSE
NGIGVLGTLR QSGNQVPVII LSARDDEYDK VAALRLGADD YITKPFGLAE LMARVAAVLR
RVGTQEISAL HRFGSVEVEL ETRSVVRQGE AIKLTHLEFE LLAFLVKNPS RVFSREELLR
QVWKQSSGTL RTVDNFVAQL RSKLESDPEN PRFFITVRGS GYRFDS
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