Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0542 |
Symbol | |
ID | 8542922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 730972 |
End bp | 732027 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646385336 |
Product | glycosyl transferase group 1 |
Protein accession | YP_003265073 |
Protein GI | 262193864 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGTGC CTGTGCCCGC GTCCCAGACA GCGTCCGCGT CCGCGCCCGG CTTCCTGCTG GTGGCGCCGC CCACGGCCAA TCCCTGGACC GGCGGCTATC TGTACAACGC GCAGTGCGCG GCCCACGCCC CGGCGCTATC GCTGGCCTTT GCCGAAGCCG ACGAGCTGTC CGAAATCGTC GAGCAAGCCG CGCCCGCGCG CTGCCTGCTC GACAGCATCT ACCTGGCCAG CCCCTCGCCC GTGGTCGATC GCGTCGCCGC CGAGCACGCG CCGCTGTGGA TGCTGCACTG CCTGCCGCAC TATCTCGTCC ACCCGGACGA GCGCGAGCGC GTGCGCGAAT GCAGCGCGCG CCGTCTGGCC CACGCGCGCG GCGCCATCAC CTCGAGCGGG TTCCTCGCCG AGCGCGTGCG CGCCTTCGTC GGCCCGGGCC TGGCCGTTGA AATCGTCCGC CCGGGCCTGG CGCCCATCCC GCGGCCCGCG CAGGCAGGGA CGCACGTCGC CCGCGATCCG GTGCGCGTGC TCAGCGTCGC CAACCTGGCG CCGCACAAGG GCGTGCTCGA ACTGGCCCGC GCGCTGGCCG CCGCCCGCGA TCTCGCGTGG CGTTGGGACA TCGTCGGCGA CGCCGCGGTC GCGCCCGAGC ACACGCGCGC CATCGAGGCG CTGCTCGGCG ACGCCGGCGT AGCCGATCGC GTCCGCTTCC GCGGCCTGGT CGCGCGCGAG CAGCTCGGCG CGCACTACGC CGAGGCCGAC CTGTTCGCGC TGCTGGCGCG CGATGAGGCC TACGGCATGG TGTTCGCCGA GGCGCAGTCC TTTGGCCTGC CGGTGCTCGC GCTGCGCGAG GGCGGGCCCT GCGAGATCGT CGAGCACGCG GGCACCGGCC TCTTATGCGC GCCCGATGAC CCTGACGACG CCGCCCGCGC GCTGCGCGCC CTGCTCGGCG ATCAGGGCAT GCGCTCCCGA CTGTCCGAAA ACGCCCGCCA GCTCCGCTTC CCCGGCTGGC CCGAGACCGC GGCCGCGTTC ACGGCCGCGT GCGCGCGCCT GAGCCAGAGC GCCTGA
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Protein sequence | MPVPVPASQT ASASAPGFLL VAPPTANPWT GGYLYNAQCA AHAPALSLAF AEADELSEIV EQAAPARCLL DSIYLASPSP VVDRVAAEHA PLWMLHCLPH YLVHPDERER VRECSARRLA HARGAITSSG FLAERVRAFV GPGLAVEIVR PGLAPIPRPA QAGTHVARDP VRVLSVANLA PHKGVLELAR ALAAARDLAW RWDIVGDAAV APEHTRAIEA LLGDAGVADR VRFRGLVARE QLGAHYAEAD LFALLARDEA YGMVFAEAQS FGLPVLALRE GGPCEIVEHA GTGLLCAPDD PDDAARALRA LLGDQGMRSR LSENARQLRF PGWPETAAAF TAACARLSQS A
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