Gene Hoch_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0517 
Symbol 
ID8542897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp700929 
End bp701660 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID646385312 
Productglycosyl transferase family 2 
Protein accessionYP_003265049 
Protein GI262193840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC ACGCCGAGTC GCCGCACGTA TCCATCGTTA TCCCCGTCTA CAACGAAGAG 
GGCATCCTGC GCGAGGCCAT CACCGAGCTG CGCGCCCAGC TCGAGTCGTT CCCCTGGCGC
TACGAGATCC TGATCTGTGA GAACGGCAGC AGCGATCGCA CCATGGCCCT GGCCGAGCAC
CTGGCCAGCG AGCACGAGGA GGTGCGCTGC CTGAGCGCGG GCGAGCCCAA CTACGGCCTG
GCCATGCGCC AGGGCATCCT GGCGGCGGCG GGCCAGTACG TCATCTGCGA CGAGATCGAT
CTATGTGACA CCGACTTCTA CCGCCGGGCC ATGGACCTGC TCGAGCACCA GGACGCCGAC
ATGGTGGTCG GCTCCAAGGC GATGAAGGGT GCCTTTGACC AGCGCCCGCT GATGCGCCGC
CTGGCCACGC GCGTGATCAA CGGCATGCTG CGGGTGGCCG TGGACTTTCG CGGCACCGAC
ACCCACGGGC TCAAGGCCTT CCGCCGCGAG CCGCTGTTGC CCATCGCCAG GCAGTGCGTG
ATCGACCGCG ACCTGTTCGC CAGCGAGTTC GTCATCCGCG CCGGCCGCGA CGGCCTGGGC
GTCGTCGAAA TTCCCGTCCA GGTGGCCGAA AAGCGCCGCC CGGCCATCAA CCTGGTCAAG
CGCGTGCCGC ACGTCCTGCA GGGCCTGGCG CGGCTCACCT ACGCCATCCG CTACCAGCGG
GGCGACGAGT AG
 
Protein sequence
MSTHAESPHV SIVIPVYNEE GILREAITEL RAQLESFPWR YEILICENGS SDRTMALAEH 
LASEHEEVRC LSAGEPNYGL AMRQGILAAA GQYVICDEID LCDTDFYRRA MDLLEHQDAD
MVVGSKAMKG AFDQRPLMRR LATRVINGML RVAVDFRGTD THGLKAFRRE PLLPIARQCV
IDRDLFASEF VIRAGRDGLG VVEIPVQVAE KRRPAINLVK RVPHVLQGLA RLTYAIRYQR
GDE