| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0504 |
|---|
| Symbol | |
|---|
| ID | 8542884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 686007 |
|---|
| End bp | 686570 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646385299 |
|---|
| Product | protein of unknown function DUF420 |
|---|
| Protein accession | YP_003265036 |
|---|
| Protein GI | 262193827 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2322] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCA ACGATCCCCG CCCACCGGCC GCCGAAGCAG GGCCGCCCTT CTTCGGCAAC
CCGTTCATGT GGCTGGTGTT CGCGCTGGTG CTGCTGGCGC TGCCGCTCAT CGGCTACATG
CTGCAGTCGG ACATGCACTG GGAGCGCGTG CATCCGGCGA TCAACGCCAT CCTCAACGGC
GCCAGCACCG TGTTCCTGTT CGCCGGCTTC CTGGCCATCC GCCGGCGCAA TATCCAGTTT
CACAAGCGCT GCATGGTGGC CGCGTTCACC ACCTCGTCGG TGTTCCTGGC CTCGTACCTG
ATCCGCTTCG CGATCTCGGG GACGCACCGC TACCCGGGCA CGGGCTTCGA CAAGACCCTG
TACCTGATCA TCCTGTTCTC GCACATGATC CTGGCCGCGC TGGCCGTGCC CATCATCTTA
CGGGCCCTGT ATCTGGCCTG GCGCGGACGC TACGCCGAGC ACGCCAAGAT CGCGCGCATC
ACCTGGCCGA TCTGGATGTA CGTGTCGGTG ACCGGCGTGA TCGTGTACCT GATGCTCTAC
CCGCTGGCCG AAGCCCTGTA CTGA
|
|---|
| Protein sequence | MQPNDPRPPA AEAGPPFFGN PFMWLVFALV LLALPLIGYM LQSDMHWERV HPAINAILNG
ASTVFLFAGF LAIRRRNIQF HKRCMVAAFT TSSVFLASYL IRFAISGTHR YPGTGFDKTL
YLIILFSHMI LAALAVPIIL RALYLAWRGR YAEHAKIARI TWPIWMYVSV TGVIVYLMLY
PLAEALY
|
|---|
| |