Gene Hoch_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0500 
Symbol 
ID8542880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp680445 
End bp681476 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content74% 
IMG OID646385295 
Producttol-pal system protein YbgF 
Protein accessionYP_003265032 
Protein GI262193823 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAGG TCGACGCGCG CTCGCGCGTG GCGCAGCGCA AGGTCGACGC CCTCGAGCTC 
GAGCTGGCCA CGCTCAAGCG CCGCCTGATC GACGCCGAGG AGAACCAACT CCCCAGCCTG
CCGGTCGAGG TCCTCGCGCC CGAGGCCGCA GCCGCGGCCG CCGAGCCAGT CGAGGACTAC
CCCGCCGACC CGGCGCTCGA TGGGGAATAC GCCCAGGTCG TGGGCATCGA TGAAGACGGC
TACGAGATCG TCTACGCCGG CGACGCCGCG CGTCCCGGCA GCGTCACCGC GCGCCTGCCC
AGGCAGCGCT CGGCGCGGAG CAGCGCCTCG CGTTCGTCCA GCGCGTCGCG CGGCTCGGCG
CCGACCATCG ACAATCAACT CGAGGCCGTC GCCCAGACCG ACGAGCGCCT GACCGTCACC
GGCCGGGTCG GCCCGACCGT TGCCGCCCGG GTGGACGAAA TCCCCGCGCC GCCGCCCGTG
CCGCCCGCGC CCGCGCCCCG CAGCTCGGAC GAGCGCGACG ACGACGGCGA CAGCGCCGCG
AGCCCGGCCC CGAGTCACGC GCCCGTACGC GCGCGCCGCA CCAAGCGCCG CGTGCGGCCC
TCGACCCCGA CCCGTCGCGC CGCCGCGCCG AGCGTGCCCG CCGCCGCCGA AGGCGTCGAT
CCCGCCGGCC TGTACCGGCG CCACCTCGAG GCCCTGCGCG ACGGCAAGCA CGACGCAGCC
GAGGCCGGTT TTCAGGCCTT CCTCGATATG TATCCCCGCC ACGATCTCTC CGACAACGCC
CAGTATTGGC TGGGTGAGTC GCTCTACGAT CGCAAGCAGT ACCGCGAAGC GCTCGCCGCG
TTTCTCGCCG TCAAGCAGCG CTTTCCGCGC GGCAACAAAG TCCCCGATGC GCTGCTCAAG
GCCGGCTTCT GCCGCATCGC GCTCGGCGAA CACGCGCAGG CGCGCGCCGC GTTGGCGCAC
GTGATCGAAC TGTTTCCCGA GAGCCAGCCG GCGGCCATCG CCGCCGAGCG CCTCGAGTCG
CTCGAGGAAT GA
 
Protein sequence
MREVDARSRV AQRKVDALEL ELATLKRRLI DAEENQLPSL PVEVLAPEAA AAAAEPVEDY 
PADPALDGEY AQVVGIDEDG YEIVYAGDAA RPGSVTARLP RQRSARSSAS RSSSASRGSA
PTIDNQLEAV AQTDERLTVT GRVGPTVAAR VDEIPAPPPV PPAPAPRSSD ERDDDGDSAA
SPAPSHAPVR ARRTKRRVRP STPTRRAAAP SVPAAAEGVD PAGLYRRHLE ALRDGKHDAA
EAGFQAFLDM YPRHDLSDNA QYWLGESLYD RKQYREALAA FLAVKQRFPR GNKVPDALLK
AGFCRIALGE HAQARAALAH VIELFPESQP AAIAAERLES LEE