| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0497 |
|---|
| Symbol | |
|---|
| ID | 8542877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 673014 |
|---|
| End bp | 674609 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646385292 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003265029 |
|---|
| Protein GI | 262193820 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAG AGACCCTGGG CAGCTACCGG GTGGTCAGCC GCCTGGGGAC GGGTGGTATG
GGCGTCGTCT ATCTCGGCGA GCACACCCTG ATAGGCCGCA AAGCCGCGGT CAAAGTGCTG
CATCCCGAGT TCTCGCAGAA GTCCGAGATC GTCGAGCGCT TCTTCAACGA AGCCCGCGCC
AGCACGGCCA TCGACCATCC CGGCATCGTG CAGATCTTCG ATTTCGGCTA CCACCAGAAC
GGCAGCGCCT ACCTGGTGAT GGAGCTCCTG AGCGGCGAGC CCCTCGACGC CCGCCTCGAC
CGCGTCGGCA AGCTCGGCGA GGACGACGCC GTGCGCATCA CGCGGCAGTG CGCGAGCGCG
CTCGAGGCCG CGCACGCCGC CGGCATCATC CACCGCGACC TCAAGCCCGC CAACATCTTC
GTGGTCCAGG ACCCGGAGAT GGAGGCCAAC GAGCGCGCCA AGATCCTCGA CTTCGGCATC
GCCAAGCTCA CCGACGAGAA CATCGCCGGC GACCTGCGCA CGCGCACCGG CAGCATGCTG
GGCACGCCCG TGTACATGTC GCCCGAGCAG TGCCGGGGCG CCGGCGGCGT CGATCAGCGC
AGCGACATCT ATTCGCTGGC CTGCGTGCTG TTCCGCATGG TCTGCGGCCG CCCGCCGTTT
TTGGGACAGG GCGTCGGCGA CATCATCGCC TCGCACCTGC GCGAGCCCGC GCCCTCGGTG
CGCTCGTTCG TGCCGACGCT GTCGACCTCG CTCGATCAGC TCGTGTTTCG CGGCCTGGCC
AAGGACCCGG CCGAGCGCTT CCAGAGTATG GAGGAGCTGG CGACCGCGCT CAAAGCCCTG
CGCCAGGGCG GCTCGATCCC GCCGCTCGGC GGCCGCGCGG GCTCGATGGG CGGTCGCCCG
AGCACGGCCG CGCCGGTTCC CGACGACGAC AGTGTCGCGC CGACCGCGCC GCTGCCGGCC
TTTGCCGTGC CCGGCTACGC GGCCGGCAGC AACACCACCC TGGGCGGCGC CGCGGCCGCG
CCGCAGCACA CCGTGCCCGC GGCCAAGAAG AGCCGCCGCT GGGTCGCGCT GACCGCGGCT
ACCGGCATCC TGGGCGGGCT CGTCGGCCTG GTCGCCGTGC TCGGTGGCGA ATCCCCGGGC
AGCGCGGGCG CCGGTCTGGG CGACGACGCC GGCATCGTGA CGCTCTCGGG CATTGCCGAC
GCCGCCGTAG CCAACGAGGA CCCCGCCGGC CGCGGCGAAG ACGTGCTCGC AGCCGGGGAG
GGCGGCGAGC CGGTGGCCGA TGCGCCGCCC GATGCCGCCC CGGTCGCGCC GCCCACCGAG
GTGGAGATCG AATCCCAGCC CAGCGAGGTC GCCGTGTTCG CGCCCGACAG CGACGAGCCC
ATCGGCCTCA CGCCGCTGAG CTACCGTCTG CCCGAGGGCG TCACGCGCAT CGAGCTCACG
CTCAAGCGCA AGGGCTTTGT CGACGCCTCG GTCGAGATCG TCGAAGGCCA GGAAGAGGCC
CTCAGCGTGG TCCTCGAGCG CCGTGCGCCG CCGCCCTCGA GCCCGCCGCG CCGGCCCCCG
CGACGTCCGA AATCGAACCC CTTGGACAGC ATGTAG
|
|---|
| Protein sequence | MIGETLGSYR VVSRLGTGGM GVVYLGEHTL IGRKAAVKVL HPEFSQKSEI VERFFNEARA
STAIDHPGIV QIFDFGYHQN GSAYLVMELL SGEPLDARLD RVGKLGEDDA VRITRQCASA
LEAAHAAGII HRDLKPANIF VVQDPEMEAN ERAKILDFGI AKLTDENIAG DLRTRTGSML
GTPVYMSPEQ CRGAGGVDQR SDIYSLACVL FRMVCGRPPF LGQGVGDIIA SHLREPAPSV
RSFVPTLSTS LDQLVFRGLA KDPAERFQSM EELATALKAL RQGGSIPPLG GRAGSMGGRP
STAAPVPDDD SVAPTAPLPA FAVPGYAAGS NTTLGGAAAA PQHTVPAAKK SRRWVALTAA
TGILGGLVGL VAVLGGESPG SAGAGLGDDA GIVTLSGIAD AAVANEDPAG RGEDVLAAGE
GGEPVADAPP DAAPVAPPTE VEIESQPSEV AVFAPDSDEP IGLTPLSYRL PEGVTRIELT
LKRKGFVDAS VEIVEGQEEA LSVVLERRAP PPSSPPRRPP RRPKSNPLDS M
|
|---|
| |