| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0481 |
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| Symbol | |
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| ID | 8542861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 655947 |
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| End bp | 656714 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646385277 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003265014 |
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| Protein GI | 262193805 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.371698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA GCGACTTGAA GATCATCGTC ACCGGCGCCG CCTCGGGCAT GGGCGCCCAT
TTCGTGAAAC GCTTGGCCGA GGCCGGCGCG CAGGTCGCCG CCGGCGACAT CAACGAGGAC
GGCCTGGCCG CCCTGGTCGC CGATGTCGGC GAGACCGCGG GCGCCGTGCA CACGCGCAAG
CTCGACGTCT CCGACGACGC GAACATCGCC TCGTTCATCG ACTGGGCCTT CGACGCGATG
GGCGGTCTCA ACGGCCTCAT CAACAACGCC GGCGTGCTCC GCGATCGCCT GCTGGTCAAG
CAGGATCGCA ACACCGGCGA GATCCTCAAG CTCTCGCGCG AGGATTGGGA TTTCGTCATC
GGCGTCAATC TCACCGGCGC GACCATGATG GTCCGCGACG TCGTCGCCAA GATGGTCGAG
AACAAGCAGG GCAAGGGCGT GGTGGTCAAC ATCTCGTCGA TCGCGCGCCA CGGCAACCGC
GGCCAGTCGA ACTACGTCTC GGCCAAGGCC GCGCTGGCCG CCAACACGGT CACCTGGGCG
CGCGAGTTCT CGCGCTTCGG CGTGCGCGTG GGCGCGGTCG CCCCGGGCAT GATCGAGACC
GCCATGACCA AAGGCATGAA CCAGAAGGCG CGCGACGCCC TGGTCGCCTC GGTGCCGGTC
GGCCGCATCG GCGAGCCCGA GGACATCTGG CGCGCGGTGC AGTTCATCGT CGAGTGCGAC
TACTTCAACG CGCGCACCAT CGACGTCGAC GGCGGCCTGA GCATGTAG
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| Protein sequence | MQLSDLKIIV TGAASGMGAH FVKRLAEAGA QVAAGDINED GLAALVADVG ETAGAVHTRK
LDVSDDANIA SFIDWAFDAM GGLNGLINNA GVLRDRLLVK QDRNTGEILK LSREDWDFVI
GVNLTGATMM VRDVVAKMVE NKQGKGVVVN ISSIARHGNR GQSNYVSAKA ALAANTVTWA
REFSRFGVRV GAVAPGMIET AMTKGMNQKA RDALVASVPV GRIGEPEDIW RAVQFIVECD
YFNARTIDVD GGLSM
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