| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0436 |
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| Symbol | |
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| ID | 8542816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 598404 |
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| End bp | 600200 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385233 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003264970 |
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| Protein GI | 262193761 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4146] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.153082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGCG GACTCGACAT CGTCCTGTTC TTTCTCTTCC TCGGCGGCGT GATGCTCGTC
GGACTGATGT CCGGCCGTCA CGAGTCATCG TCCGAGGATT ACTTCCTGGC CGGTCGCAAG
ATCCCGTGGT GGGGCGTGGC CGGCTCGATC TTCGGCACCA ACGTGAGCGC CAACCACCTG
GTCGGCATGC TCGGCGTCGG CTTCTCCATC GGCTTTGCCC AGAGCCACTA CGAGCTCGGC
GCCATCGCCG CCATTTTAGT CCTCTGCTAC TTCTTCCTGC CGGTGTACCG CCGGCTCGGC
ATCTTCACGC TGTCCGAATA CCTGGGCCGA CGCTTCGGCG ACAGCAGCCG GCTGCTGTAC
ACGCTGATCC TCGTGGTCCT CATCGTCGTG CAGATGACGG CCGCCTTCTA CATCGGCTCG
CGCTCGCTGG GCCTGCTGCT GGCCGACACG CCGCTCGAGC TCGGCTACCT CGGCGGCGTC
GCCGTGCTGG TGATCATCAC CACCGCGTAC ACCATCTTCG GCGGGCTCAC GGCGGTGGTG
TGGACCGACG TCATGCAGTC GCTGCTGCTG CTCGTGGCCG GCGTGCTGGT GGCCGTGCTC
ACCTTCGCCC AGCCCGAGGT CGGCGGCTTC GCGGCCATGA TGGCGCGCGA TGCGGCCCTG
CCCGCGGCCG AGCAGAAGAT GCACCTGTAC CTGCCGTCCT CGCATCCCGA CCTGCCGTGG
ACCGGCGCGC TCACCGGTCT GATCGCGCTG CACGTGTTCT TCTGGAGCAC CAACCAGTAC
CTGGTGCAGC GCGCGCTGGC GGCCAAGAGC CTCACCCAGG CCCGCGTCGG CGCGCTCACG
GGCGGCTTCC TCAAGCTGCT CATCCCGCTG TTCTCGGTCG CCGGCGGCGT GGCCGCGGCC
CAGCTCTTCG CCGCGCGCTC GGTCAGCGCC GCCCCCGACG AGGCCTTTCC AGTGCTGGTC
AACCTGGTCA TCCCGGCCGG CTACGGGCTC ATCGGCATCA TCTCCGCCGG CCTCATCGGC
GCCATCATCT CGTCGATCGA TTCGATGATG AACTCGGCCG CGACCCTGGT CACCGTCGAT
ATCTACAAGC ACCGCCTGCG CCCCGCGGCC GACGACGCCA GCATGGTGCG CGTGGGTCGC
TGGGTCATCG TCGCCATCGT CGGGCTCTCG ACCCTGCTGG CCATCACCAG CTACGACCCG
GACTCGCGCG ACAACTTCTT CCTGGTGGTG TCGCGGCAGA GCTCGTACTT CACGCCCGGG
CTGATCGCGG CCTTCGTGCT GGGCATGTTC TACCGCCGCG CCAACGGCGT CGGCGCGGTG
CTGGCCATCG CCTGCGCGCC CGTGCTCTCG CTGGTCTTCG AGCTGGCCTA CGACGGCTGG
CTGCACGTGT ACTTCGACGA GCTGCTGGGC GCGCGCCTCA ACTTCATGCA CCGCGTATTC
CTCACCCTGC TGGCCTCGCT CGCGGTGCTG GTCGTCGGCA GCCGCGTGCG CCCGGCCGAT
CCCGAGCGCG CCCGCTACCT GTGGGTCGAG GCCGCGGGCG AGCAGCCGGC CCCGCTCGCC
GCCGTGGTCG GCAAGCTCGG CCTGTTCGCG CTGATCCAGG CCGCGCTGGC CGGGCTGCTG
GTCACCGGCG CGCTCCCGCC CGCGCTGCTG GCCGCGCTCA GCGCCGTGCT CACGGCGGCG
CTGTTCGCCT GGCACATCGC CCGCTACCGC CGCCCCGAGG GGCTGCTGCG CGACGATCGC
GTGCTGGCCG CGGCGCTGTC GAGCGCGACC ATGTTCATGA TGTTTGCGTT CTATTGA
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| Protein sequence | MLGGLDIVLF FLFLGGVMLV GLMSGRHESS SEDYFLAGRK IPWWGVAGSI FGTNVSANHL
VGMLGVGFSI GFAQSHYELG AIAAILVLCY FFLPVYRRLG IFTLSEYLGR RFGDSSRLLY
TLILVVLIVV QMTAAFYIGS RSLGLLLADT PLELGYLGGV AVLVIITTAY TIFGGLTAVV
WTDVMQSLLL LVAGVLVAVL TFAQPEVGGF AAMMARDAAL PAAEQKMHLY LPSSHPDLPW
TGALTGLIAL HVFFWSTNQY LVQRALAAKS LTQARVGALT GGFLKLLIPL FSVAGGVAAA
QLFAARSVSA APDEAFPVLV NLVIPAGYGL IGIISAGLIG AIISSIDSMM NSAATLVTVD
IYKHRLRPAA DDASMVRVGR WVIVAIVGLS TLLAITSYDP DSRDNFFLVV SRQSSYFTPG
LIAAFVLGMF YRRANGVGAV LAIACAPVLS LVFELAYDGW LHVYFDELLG ARLNFMHRVF
LTLLASLAVL VVGSRVRPAD PERARYLWVE AAGEQPAPLA AVVGKLGLFA LIQAALAGLL
VTGALPPALL AALSAVLTAA LFAWHIARYR RPEGLLRDDR VLAAALSSAT MFMMFAFY
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