| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0427 |
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| Symbol | |
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| ID | 8542807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 588789 |
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| End bp | 589751 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385224 |
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| Product | peptidase A24A domain protein |
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| Protein accession | YP_003264961 |
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| Protein GI | 262193752 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0746987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCCC CGTCCGACGA ACTGGTGCAA TTGGCCCACG GCGCGGGCGG CTATGCGCTC
GCGTTTATCC TCGGCGCGCT GTTCGGCAGC TTCGCCAACG TGTGTATCTA TCGCTGGCCG
CCCACGGACG AACATCCCGG CGGCCGCTCG GTGGTCACCC CGGGCTCGCA CTGCCCGGCC
TGCGGTCACG CGATCCGCTG GTACGACAAC TTGCCCATGC TCGGCTACCT GCTGCTGCGC
GGTCGCTGCC GCGATTGCGG CCTGGGCATC GCGCCCCGCT ATCCGCTGGT CGAGCTGCTC
ACGGCCGTGC TCTTCGTGTC GCTCTACCAC CACGTCATGG CCGGCGCCTA CCTCTACGAG
CCGCTGCCGC AGCAGCTCCT GCACTTCGTG GTGCTGGCCG CCTTCGCCTT CGTGCTCGTG
GTCATCGCCT TCATCGATCT CGACCACCGC CTCATCCTCG ACAAGATCAC CTATCCGGGG
ATACCGATCT TCTACGGCCT GGGGCTGCTG CTCGAGCGCC CCTGGCTCGA CGGCCTGATC
GGCGCGGCGC TGGGCTACGG CGTCGTGCGC CTGCTGGCCG ACGGCTACCG CCTGCTCACC
GGGCGCGAGG GCATGGGCTA CGGCGACGGC AAGCTGCTGG CCCTGATCGG CGCGCTCTTC
GGCTGGCAGG CGGTGCTGGC CAGCCTGTTC CTCGGTTCCA TCATCGGCTC GGTCCTCGGC
ATCACGGCCA TCGCCCTGGC GCGTCGCGCC GCGCGCGGAC GAGACGACAC CGACGCGGCG
CCCGACGCGG GCGAAGCGAA CACCGACGCG GCCAGCGCCG ACCAGGTGGG CGGCACCCGC
GGCGAGGACG ACGAGCTACC GCTGCGGCAC GTCGAGCTGC CCTTCGGCCC CTTCCTGGTC
ATCGGCGCGC TGGTCTACGT GTTCGTGCAC CCTTTCTACC AGCTCGTCCT CGCCGTCCCC
TGA
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| Protein sequence | MFPPSDELVQ LAHGAGGYAL AFILGALFGS FANVCIYRWP PTDEHPGGRS VVTPGSHCPA
CGHAIRWYDN LPMLGYLLLR GRCRDCGLGI APRYPLVELL TAVLFVSLYH HVMAGAYLYE
PLPQQLLHFV VLAAFAFVLV VIAFIDLDHR LILDKITYPG IPIFYGLGLL LERPWLDGLI
GAALGYGVVR LLADGYRLLT GREGMGYGDG KLLALIGALF GWQAVLASLF LGSIIGSVLG
ITAIALARRA ARGRDDTDAA PDAGEANTDA ASADQVGGTR GEDDELPLRH VELPFGPFLV
IGALVYVFVH PFYQLVLAVP
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