| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0425 |
|---|
| Symbol | |
|---|
| ID | 8542805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 584643 |
|---|
| End bp | 585929 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646385222 |
|---|
| Product | heat shock protein DnaJ domain protein |
|---|
| Protein accession | YP_003264959 |
|---|
| Protein GI | 262193750 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.197933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGTACCC TGAAGGTCAA ATGTCCGACA TGGGTCCATG TCGAGACCTT CTATAGTCGC
AAGCTGCGCA AGGACAAGAC CCTGACGCTG CGCGTGCCCT TCCGTCCTGA GGACGGGAGT
CAGCTCTCTC TCGGTCTCGA CCTGCCCACG GGGGAACAGA TTCCGATCCC GGGAACCGTC
ATCAACGTGA CCCCCGAGGA CGATGGGCGC CGCAACGCCA TGCGCCTGTT CCTGCACGGG
CTCACGCCCG AGCTGCTGGC GCGGCTCAAA GCGCTGGTGG CCGAGGCCAA AGAGAGCGCG
CCCGAGCAGT TCACCATGCC GCCGCCGACG CCGCCCGGCA GCAGCGCGGT GCCGCCGCCG
GTGCCGCGCG CCGCGTCCGC GCCCCGGTCC GCGCCCCCGC CCGCGCCCCC GGTGGCGCCG
AAAGCGCCCG CCACGCAGGC GCCCCAGGAG TTCGATCTCA CCAGCGCGCT GCGGCCCATG
CCCAAGGCCG CGAGCGCGGC GTTGCCGGCG AGTCGCCCTG AAGACGCCCC GGTGGACGAA
CTCATCGAGC CGCCGTACAC GCCCACGATC GACAGCGTCA GCGAGTACGA GCGCGACGTC
TTCGTCCAGC TCGACGAAAC CCTGCGCCGC CTGCGCGAGA GCTCGGCGCA CGAGGTCCTG
GGCGTGGCCG AAGACGCCGA CGTCGCCGCG GTGCGCGAGG CCTACTTCGC GCTCAGCAAG
CGCTTCCACC CCGACCTGTT CGCGCGCTAC CGCTCCACCG CCATCCTGCA CATGGCGCAG
GAGCTGTTCA TCCTCATCAA CAAAGCCTAC GACCGCACCC GCGACGCCCT GGTCGCCGCC
GGCCAGGCCA TCGTCGCCGG CCCGGCCCTG ATCTCGCACG AGGGCTGGTT GGCCGGGTTT
TCGGACATCG ACGCCGCCGA CGAGCCCGGC GCCGCCGAGC CCGCGGCCGA CGGCAGCGGC
ACCTGGTCGC TCTCGGACAG CTCCGTGGCC GCGCGCTACC CGGGCATCGA AGACGTCCTC
GGCCTGGTCG CCGAGCGCAA ATTCGAAGAG GCCCGCGAGC AGGTCGCCGC CGCCCTGCAC
TTCGACCCGC GCGACCGCCG CATGCGCGCC ATCTACCACG TCATCAGCGG CCGCGAGCTG
ATGGCGGCGG GCGAGGACTC CGCCGCCGTG ACGCAATTCG AAGCCGCGCT GGCCCACGAC
CGCAACAGCC GCGAGGCGCG CGACGGCCTC GACGAGCTGC GCGCGCGCGG TCGTCACAGC
GGCCCCTATC CCAGGACGCT GCGATGA
|
|---|
| Protein sequence | MRTLKVKCPT WVHVETFYSR KLRKDKTLTL RVPFRPEDGS QLSLGLDLPT GEQIPIPGTV
INVTPEDDGR RNAMRLFLHG LTPELLARLK ALVAEAKESA PEQFTMPPPT PPGSSAVPPP
VPRAASAPRS APPPAPPVAP KAPATQAPQE FDLTSALRPM PKAASAALPA SRPEDAPVDE
LIEPPYTPTI DSVSEYERDV FVQLDETLRR LRESSAHEVL GVAEDADVAA VREAYFALSK
RFHPDLFARY RSTAILHMAQ ELFILINKAY DRTRDALVAA GQAIVAGPAL ISHEGWLAGF
SDIDAADEPG AAEPAADGSG TWSLSDSSVA ARYPGIEDVL GLVAERKFEE AREQVAAALH
FDPRDRRMRA IYHVISGREL MAAGEDSAAV TQFEAALAHD RNSREARDGL DELRARGRHS
GPYPRTLR
|
|---|
| |