| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0421 |
|---|
| Symbol | |
|---|
| ID | 8542801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 581035 |
|---|
| End bp | 581589 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646385218 |
|---|
| Product | GtrA family protein |
|---|
| Protein accession | YP_003264955 |
|---|
| Protein GI | 262193746 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2246] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.278795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTTCC GCCGTCTGTT TCAACGCTTC GTTCTGCCGT TTTTCACGCG GCGCTTTCTC
AAGTTCGCGA TCGTGGGCGC CAGCGGCGTG CTGGTCAACC TCGGCTGCCT GGCGCTGCTG
CGCGCGCTCT CGGTGCAGAT CAACCTGGCC TCGGCGATCG CGATCGAGCT GTCGCTGCTG
TCGAACTTCG CGGTCAACTA CCTGTGGACC TTTCGCGATG TCTCCGGCGG TTGGCTGCGG
CAGGCGCTGC GCTTTCACCT GGTGTGTCTG GGCGGCGCGG TGTTTCAGTT CTCGAGTTTT
GTGATCATGA ACGTGGTGTG GATGCTGCTT CTGTGGAGCG GCGACGCGCG CACCGAGTAC
TTTGCGGGCG CCGACACCAT GTTCGAGCGC TGGCTGTGGC GACCCTTGAT GTCGCCGCCC
GAGGTCGGCG CGTGGGTGTT CCTGTCGCAG CTCATCGGCA TCGGCTGCGG CATGGTATGG
AACTACCTGC TCAACTTTTA CTGGACCTGG TCGGTGCACA AGCGCGCCGA ACCCGGAGGC
GAGCATGTCT CTTGA
|
|---|
| Protein sequence | MLFRRLFQRF VLPFFTRRFL KFAIVGASGV LVNLGCLALL RALSVQINLA SAIAIELSLL
SNFAVNYLWT FRDVSGGWLR QALRFHLVCL GGAVFQFSSF VIMNVVWMLL LWSGDARTEY
FAGADTMFER WLWRPLMSPP EVGAWVFLSQ LIGIGCGMVW NYLLNFYWTW SVHKRAEPGG
EHVS
|
|---|
| |