Gene Hoch_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0420 
Symbol 
ID8542800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp580174 
End bp580809 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID646385217 
ProductApaG domain protein 
Protein accessionYP_003264954 
Protein GI262193745 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2967] Uncharacterized protein affecting Mg2+/Co2+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.416529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCC GTCCCAAGCG CTATTTGCAG AGACTGGTAT ACCGCTTCGT GAGCTCGCTG 
CTGCGCTGGC AGGAGCCCGA AGACGACGAC GATCTGGCCG CCGCGAGCGG CTCTCCGCCG
GGGTCCGACC CGCGGGCCAG GCGCGGCGCC GCGGCCGCAG AGACGGGCGA CACGCCGCTT
GCGTCGCCGG CGCCGGCGCG GCAAAGTCGG GCGGTGCCAA CGCTTGTCGC AGAGCCGACC
TCGAACGTGA TTACTGAGGG AATCCGGGTC ACCGTGCGCT CGGTGTACCT CCCCAACCAG
TCCGAGCCCG AGGATCAGCG CCACGTCTTC GCCTATACCG TGTCGATCAG CAACGAGGGC
CAACGGCCGG CCCAGCTCCG CACCCGCCAC TGGATCATCA CCGACGGCAA CGGCCAGGTG
CAGGAGGTCA AGGGCCCCGG CGTGGTCGGC GAGACCCCGC GGCTCACGCC CGGCCAGTCG
TTTCAGTACA CCTCGGGCTG CGTGCTCAAG ACCCCGGTGG GCACCATGCA CGGCACCTAT
CAGATGTACC GCGACGACGG CAGCCAGTTC GACGCCGAGA TCGCGCCCTT CACCCTGGCC
ATGCCGCACA GCGACGACGG CCGGCTCATG AACTGA
 
Protein sequence
MRRRPKRYLQ RLVYRFVSSL LRWQEPEDDD DLAAASGSPP GSDPRARRGA AAAETGDTPL 
ASPAPARQSR AVPTLVAEPT SNVITEGIRV TVRSVYLPNQ SEPEDQRHVF AYTVSISNEG
QRPAQLRTRH WIITDGNGQV QEVKGPGVVG ETPRLTPGQS FQYTSGCVLK TPVGTMHGTY
QMYRDDGSQF DAEIAPFTLA MPHSDDGRLM N