Gene Hoch_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0419 
Symbol 
ID8542799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp579176 
End bp580132 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content74% 
IMG OID646385216 
Productperiplasmic binding protein 
Protein accessionYP_003264953 
Protein GI262193744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.892372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG CCCTCGCCAT CGGCCTGCTC GCCCTCGCCT GCTGCCTTCC CTGCGCCTCG 
GGCTGTCGCG ATCGCGAACG CGACGACGCC GCGCAGCCGG CCGAGAGCAG CGAGGCTCCG
ACCGTGCGCC GCGTGGTCAC GCTCACGCCC TCGGCCACCG AGATCGTGGC CGCGCTCGGC
GCCACCGAGC TGCTCGTCGG TGTCGACGGG TATTCCGACT ACCCGCCGGC GGTGCGCACG
CTGCCCCGGG TGGGCGACTT TCTGCGCCCG AACTTCGAGA CCATCGTCGC GCTGCAGCCC
GACCTGGTCA TCGCCGACGC GGTCCACGTC GAGGTCGCCG AAGGCCTCGA AGCCGCCGGC
GTGAACACGC TGACGCTGCC CATGCACACC CGCGGCGACG TCTACCGCGG CCTGGACGCG
GTCGGCCAGG CCCTGGGCCG CGCCGACGCG GCCAGCAGCG CGCGCGCTGC CATCGACGCC
GAGCTCGCCC GCGTCGCTCA GCGCGCGCAC CAGCTCGGCG AAGGCGGCGA GCGGCGTCCG
CGCGTGCTCG CCGTTGTCGA CCGCGCGCCC GACGACCTCG GCAACCTGGT CGCCGCCGGC
CCCGGCAGCT ACCTCGACGA GCTGCTCGCG CTGGTCGGCG CCGACAACGC CCTCGCCGAT
TACCAGGTCC GCTATCCCAA ACTCTCGGCC GAGCAGCTCC TGCGCGCCCG CCCCGAGCTC
ATCGTCGACC TCAGCCCGAG CGACAACCCC GCCCACACGC GACGCGTCTG GGCCGCGCTG
TCCGAAATCC CCGCGGTCGC CGCCGGACGC GTGTACGCCC TCGACGACGC CGCCCTGTCC
AGCCCCGGCC CGCGCATCGG GGCCGCCGCG CTGCGCCTCA GCGAGGTGGT TCACGGCGCC
GAAGCCGACC CGACGACGAC CGAACAAAAA ACAGCTTCTA CACCTAAAAA AGAATAA
 
Protein sequence
MRAALAIGLL ALACCLPCAS GCRDRERDDA AQPAESSEAP TVRRVVTLTP SATEIVAALG 
ATELLVGVDG YSDYPPAVRT LPRVGDFLRP NFETIVALQP DLVIADAVHV EVAEGLEAAG
VNTLTLPMHT RGDVYRGLDA VGQALGRADA ASSARAAIDA ELARVAQRAH QLGEGGERRP
RVLAVVDRAP DDLGNLVAAG PGSYLDELLA LVGADNALAD YQVRYPKLSA EQLLRARPEL
IVDLSPSDNP AHTRRVWAAL SEIPAVAAGR VYALDDAALS SPGPRIGAAA LRLSEVVHGA
EADPTTTEQK TASTPKKE