Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0419 |
Symbol | |
ID | 8542799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 579176 |
End bp | 580132 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646385216 |
Product | periplasmic binding protein |
Protein accession | YP_003264953 |
Protein GI | 262193744 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.892372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCCG CCCTCGCCAT CGGCCTGCTC GCCCTCGCCT GCTGCCTTCC CTGCGCCTCG GGCTGTCGCG ATCGCGAACG CGACGACGCC GCGCAGCCGG CCGAGAGCAG CGAGGCTCCG ACCGTGCGCC GCGTGGTCAC GCTCACGCCC TCGGCCACCG AGATCGTGGC CGCGCTCGGC GCCACCGAGC TGCTCGTCGG TGTCGACGGG TATTCCGACT ACCCGCCGGC GGTGCGCACG CTGCCCCGGG TGGGCGACTT TCTGCGCCCG AACTTCGAGA CCATCGTCGC GCTGCAGCCC GACCTGGTCA TCGCCGACGC GGTCCACGTC GAGGTCGCCG AAGGCCTCGA AGCCGCCGGC GTGAACACGC TGACGCTGCC CATGCACACC CGCGGCGACG TCTACCGCGG CCTGGACGCG GTCGGCCAGG CCCTGGGCCG CGCCGACGCG GCCAGCAGCG CGCGCGCTGC CATCGACGCC GAGCTCGCCC GCGTCGCTCA GCGCGCGCAC CAGCTCGGCG AAGGCGGCGA GCGGCGTCCG CGCGTGCTCG CCGTTGTCGA CCGCGCGCCC GACGACCTCG GCAACCTGGT CGCCGCCGGC CCCGGCAGCT ACCTCGACGA GCTGCTCGCG CTGGTCGGCG CCGACAACGC CCTCGCCGAT TACCAGGTCC GCTATCCCAA ACTCTCGGCC GAGCAGCTCC TGCGCGCCCG CCCCGAGCTC ATCGTCGACC TCAGCCCGAG CGACAACCCC GCCCACACGC GACGCGTCTG GGCCGCGCTG TCCGAAATCC CCGCGGTCGC CGCCGGACGC GTGTACGCCC TCGACGACGC CGCCCTGTCC AGCCCCGGCC CGCGCATCGG GGCCGCCGCG CTGCGCCTCA GCGAGGTGGT TCACGGCGCC GAAGCCGACC CGACGACGAC CGAACAAAAA ACAGCTTCTA CACCTAAAAA AGAATAA
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Protein sequence | MRAALAIGLL ALACCLPCAS GCRDRERDDA AQPAESSEAP TVRRVVTLTP SATEIVAALG ATELLVGVDG YSDYPPAVRT LPRVGDFLRP NFETIVALQP DLVIADAVHV EVAEGLEAAG VNTLTLPMHT RGDVYRGLDA VGQALGRADA ASSARAAIDA ELARVAQRAH QLGEGGERRP RVLAVVDRAP DDLGNLVAAG PGSYLDELLA LVGADNALAD YQVRYPKLSA EQLLRARPEL IVDLSPSDNP AHTRRVWAAL SEIPAVAAGR VYALDDAALS SPGPRIGAAA LRLSEVVHGA EADPTTTEQK TASTPKKE
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