Gene Hoch_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0414 
Symbol 
ID8542794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp571764 
End bp572615 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content76% 
IMG OID646385211 
ProductABC transporter related protein 
Protein accessionYP_003264948 
Protein GI262193739 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.928661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCGC CCCGCCCCGA GCCCGAAGCG CCCGCACCGG TCCGCGCCGA GCCGAATGGC 
GCTACGGCCT CAGAGGCCGT GATCGCGCTC GACGCTGTGT CGTTCCGCTA CGGCAGCGAC
GACATCCTGA GCCAGCTCGC GCTGGCCATC GCGCCCGGCC AGCTCACGTG CATCGTCGGC
CCCAACGGCG CCGGCAAATC CACCCTGCTC AAGCTCATGG CTGGGCTGCT GCCGCCGGCG
AGCGGCTCGG TGCGCTGCTT CGGCCGCGAT CCCCGCGCGC ACAGGCGCCG CGCCCTGGCC
CGGCGCCTGG CCTTTGTGCC CCAGCACTAC GCCCTGGCGT TTCCCTTCAC CGCCCGCGAG
GTCGTGCTCA TGGGCCGCTA CCCGCACCGC GGCGCCGGCC TGCTCGGGCT CGAGCGCGAC
GACGACCTCG AGGCGGCGTC CGCGGCCATG GCCCGCTGCG ATGTCGCCGA GCTGGCCGCG
CGCCGCTTCG ACACCCTCAG CGGCGGCGAG CAGCGGCGCG TGCTGCTGGC CCAGGCCTTC
TGCCAGGAGG CCGAGCTGAT CCTGCTCGAC GAGCCCACGG CCGCGCTCGA CCCGGCCCAC
GCCATCGCCC TGTTCGCGGC GCTGCGGGCC GAGCGCGACG CGCGCGCGGC CACGGCCGTG
GTGGTCACCC ACGACCTCAA CCTGGCCGCG CGCTTCGGCG ACCGCCTGTT GCTCATCGAC
CGCGCCCGCC TGCGCGGCGA CGGCGCGCCC GCCGAGGTGC TGGCGTCTGC GGCCGCGGCC
GAGGCCTTCT CCGTGGCCAT GCACGTCGGC CACCTGCCGG GCACGCGCAC GCCCTTCGTC
GTGCCGAGGT GA
 
Protein sequence
MTSPRPEPEA PAPVRAEPNG ATASEAVIAL DAVSFRYGSD DILSQLALAI APGQLTCIVG 
PNGAGKSTLL KLMAGLLPPA SGSVRCFGRD PRAHRRRALA RRLAFVPQHY ALAFPFTARE
VVLMGRYPHR GAGLLGLERD DDLEAASAAM ARCDVAELAA RRFDTLSGGE QRRVLLAQAF
CQEAELILLD EPTAALDPAH AIALFAALRA ERDARAATAV VVTHDLNLAA RFGDRLLLID
RARLRGDGAP AEVLASAAAA EAFSVAMHVG HLPGTRTPFV VPR