| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0411 |
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| Symbol | |
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| ID | 8542791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 566276 |
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| End bp | 568996 |
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| Gene Length | 2721 bp |
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| Protein Length | 906 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385208 |
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| Product | TonB family protein |
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| Protein accession | YP_003264945 |
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| Protein GI | 262193736 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCA CCACGGTTGT CATCTGCGCG GCCGCCCTGC TCTCGACGGT CTCGCTCGCC
CACGCGCAGG ATGGCGCGCG CCGCGACGAG GGCACCAACG AGGTGGAGGT CCCCGCGCCC
ACGCTCACCA AGGCCCCGGC GCTGCTCGAA GCCGCGGCCC CGGTGTATCC GCAAGAGGCG
CTCGATGCCG GCCTCGAGGC CACGGTCCCG GTCCGCATCC ACATCGATGA GACCGGCATC
GTCACCTTGG TCGAGGTCAT TGAACCGGTG GGCAAGGGCT TCGACGAGGC CGCGGTCGAG
GCCGCCGAGC TGTACGTGTT CTCGCCCGCC GAGTTCGACG GCACGCCGGG CCCGATCGTG
GTCGAGACCA ACATCCACTT CACCATCGAG GTCCAGGAAG AGGAGCCGCC GCCACCGCCG
CCGCCGCCGG CGAGCGAGGA AGACGAGGCC GCCGCCCTGG GTCCGCCCTC GCACGGCGGC
GACGCGCGCC TGCCCGTGAC CATCAGCGGC CAGGCCGTGG AGCGCGGTTC GCGGCGCGCG
CTGGCCGGCG TCATCGTGGC GCTGGCCGAG CTCGGCGTCG ACGCCATCAC CGACGAGGAC
GGCAACTTCT ACTTCCACGG CGTGCCCGCG GGCACCTACC GGGTGATCGC GGTCGAGGAT
CGCTACGACC GGCTGGAGCG CTCGCTCGAG CTCACGGCCG ACGAGCGCGT CGAGGTGCGC
CTGTGGATGC GCGCCAAGGG CGGCAACCCC TACGAGACCA TCGTCGAGGG CGAGCGCGAG
GTGCTCGAGG TCACCAAGCG CACGCTCGAG CGCCGCCAGC TCACCACCGT GCCCGGCACC
TTCGGCGACC CCATCCGCGT GATCCAGGCC CTGCCCGGCA TGGCGCTGAG CCCCTTTGGC
ACCGGCCTGC TGCTGGTGCG CGGCTCCAAC CCCGACGACA GCGCCGTGTT CATCGACGGC
CACCGGGTGC CGCTGATCTT CCACTTCCTG GGCGGGCCCT CGATCCTCAA CGCCGAGTTC
CTCGAGTCCA TCGACCTGTA TCCCGGCGGC TATCCGGCGC GCTTCGGCCG CGCGCTCGGC
GGCGTGGTCG CGGTCGAGAC CCGCTCCTCC GAGAGCGACG GCGTGCACGG CTCGGCCGAT
ATCGACATCT TCGACGCCGG CGCCTACCTG CGCATGCCCG TGGGCGACAA GGGCTCCTTC
GCCATCGCCG GCCGGCGCTC GTACCTCAAC CTGGTGCTCG ACCAGGTCAT CCCGCGCGCC
GCGCCCGGGG CCGCGGTGGT GGTCGTGCCC GTGTACTACG ACTACCAGAT GCGCTTCGAC
TACGACCTCG GCGCCGAGGG CAGCGTGTCG CTGTTCTGGC TGGCCTCGAG CGATCGCCTC
GACGTGGTCG CGGTCGATGA CGAGACCGAG CAATCGCTCG ACCTGAGCAC CAGCATCGCC
TTCTCGCGCC TCATCGGCAC CTACCGCCGG CCCATCGGCG GCGGCCTGCG GCTGACCATG
TCGCCCATGT ACGGGCGCGA CCGGGTGCGC TTCAGCGGCG GCCAGGCCGA GTCCGACGCG
GCGTTCACGG GCGCCGACAT CATCATGGAC ACGCTCGGCT ACCGCATGCG CGTCGATGGC
CGCGTCAACG ATCTGTTGGT GGTCGACCTC GGCATCGACC TGGAGTCGCG GGTGACCCGC
TACGACCTGC TCATCCCGCT GTTCACCGAC GTGCCGCAGC AGCCCGGCGG CCCCTCGCAG
CTCCCGCCCG AGGATTTCGA ACAGTCGGTC GATTTCTTCG CCTACGGCCT GCACGCCGAC
CTGGGCTGGG ACGCCACCGA CAAGCTCAAG CTGGTGCCCG GCCTGCGCTT CGACGGCTAC
TGGCTGGCCG GCGAGGTGCG CAAGACCATC GACCCGCGCA TCTCGGGGCG CTACCAGATC
AACGACGCGT GGACGGCCAA GGGCTACGTC GGCCTGTTCC ACCAGCCGCC GCAGCCCGAG
ACTGTCGACT CGCTGGTCGG AAACCCGGAC CTCACGCTCG AGCGCGCGCT GCACACCGGC
CTGGGCGGCG AATGGGTGCC GGCCAAGGCG TGGAAGGTCG ACGCCGAGGT CTACTACGTG
GACCGCTACG ACCAGGCCGC GTTCAACGAC GCCGGCGACC GCATCGTGAC CGAGGATCCG
CGCACCGGCG AGGTCCGGGT GACGCCGGTG CTGCTCGAGA ACACGGCCGC GAGCTACACC
ACCGGCTTCG AGCTCATGGT GCAGCGCGAG GTCACGCAGA ACCTCTACGG CTGGCTGGCC
TATACCCTGA GCTACTCGCG CAACCGCGAG CGCCCCGAGG ATCCCGAGAC CCCGACCTTT
TTCGACCAGC GCCACGTGCT CAACGCGGTC GCCAGCTATC GCTTCGACAA CGGCTGGGAG
ATCGGCGGGC GCTTTCGCCT GGGCACCGGC CGGCCGATCA CGCCCATCGA CAGCGGCACC
TTCATCGGCG ACGAGACCGA CTACGATCCG TATCCGGGCG AGATGCTCAG CGAGCGCCGC
AAGACCTTTC ATCAGCTCGA CCTGCGCGCC GAGAAAACCT GGACATTCAA TTACTTCACC
ATGGCCGCCT ACCTCGACAT CCAGAACGTG TTCAACGTGA CCAACGAGGA AGGCGTGCAG
CGCGACTATC GCTTCCGCCG GGAGGCCCCG GTGCAGAGCA TTCCCATCCT GCCGACCCTC
GGCGTGCGAG GACAGTGGTG A
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| Protein sequence | MLRTTVVICA AALLSTVSLA HAQDGARRDE GTNEVEVPAP TLTKAPALLE AAAPVYPQEA
LDAGLEATVP VRIHIDETGI VTLVEVIEPV GKGFDEAAVE AAELYVFSPA EFDGTPGPIV
VETNIHFTIE VQEEEPPPPP PPPASEEDEA AALGPPSHGG DARLPVTISG QAVERGSRRA
LAGVIVALAE LGVDAITDED GNFYFHGVPA GTYRVIAVED RYDRLERSLE LTADERVEVR
LWMRAKGGNP YETIVEGERE VLEVTKRTLE RRQLTTVPGT FGDPIRVIQA LPGMALSPFG
TGLLLVRGSN PDDSAVFIDG HRVPLIFHFL GGPSILNAEF LESIDLYPGG YPARFGRALG
GVVAVETRSS ESDGVHGSAD IDIFDAGAYL RMPVGDKGSF AIAGRRSYLN LVLDQVIPRA
APGAAVVVVP VYYDYQMRFD YDLGAEGSVS LFWLASSDRL DVVAVDDETE QSLDLSTSIA
FSRLIGTYRR PIGGGLRLTM SPMYGRDRVR FSGGQAESDA AFTGADIIMD TLGYRMRVDG
RVNDLLVVDL GIDLESRVTR YDLLIPLFTD VPQQPGGPSQ LPPEDFEQSV DFFAYGLHAD
LGWDATDKLK LVPGLRFDGY WLAGEVRKTI DPRISGRYQI NDAWTAKGYV GLFHQPPQPE
TVDSLVGNPD LTLERALHTG LGGEWVPAKA WKVDAEVYYV DRYDQAAFND AGDRIVTEDP
RTGEVRVTPV LLENTAASYT TGFELMVQRE VTQNLYGWLA YTLSYSRNRE RPEDPETPTF
FDQRHVLNAV ASYRFDNGWE IGGRFRLGTG RPITPIDSGT FIGDETDYDP YPGEMLSERR
KTFHQLDLRA EKTWTFNYFT MAAYLDIQNV FNVTNEEGVQ RDYRFRREAP VQSIPILPTL
GVRGQW
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