Gene Hoch_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0403 
Symbol 
ID8542783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp554120 
End bp555412 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID646385200 
Productband 7 protein 
Protein accessionYP_003264937 
Protein GI262193728 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCGA TTCTCTTTTT GATCGCCCTG GCCGCCGCCA TCGCCATCGC CATCCTGGTG 
TGGAAGAACC TCGAGATCTG CGCCCCTAAC GAGGTATTGA TCTTCTCCGG TAAGCGCACC
AAGTACGCCG GCCGCGAGAT CGGCTACCGC CTGGTCCAGG GCGGACGCGG GTTTCGCTGG
CCGCTCATCG AGATCGTCGA TCGCCTCGAT CTCACCAACA TGATCATCGA TATTCGCGTG
CAGGGCGCCT ACTCCAAGGG CGGTATTCCG CTCAACGTCG ACGCCGTGGC CAACGTCAAG
ATCGCCAGCG TCGAGCCCAG CATCGGCAAC GCCATCGAGC GCCTGCTCGG CAAGTCGCGC
GACCACATCA TGACCGTCGC TCGCGAGACC CTCGAGGGCA ACCTGCGCGG CGTGCTGGCC
ACGCTCACGC CCGAGGAGGT CAACCAGGAC CGCGAGAAGT TTGCCGACAG CCTGCTCCAG
GAAGCCGACC ACGACCTGTC GAGGCTCGGC CTCGAGCTCG ACACGCTCAA GATCCAGAAC
GTCTCGGACG ACCGCGGTTA CCTCGACTCG CTGGGTCGCC GGCAGTCGGC GGCCGTGATC
ATGCGCTCGC GCATCGCCGA GGCCGAGAAC AAGGCGCACG CGGCCGAGCG CAGCGCGGCC
AACCTCGAGA CCCAGGAGAT CGCCAAGATC GTCGCCGAGA TCGAGAAAGC GCGCGCCGAC
GCCGAGCGCC GCATCGTCGA TGCGCAGACG CGCAAGGACG CCATGGTGGC CGAGGCGCGC
GGCCAGGTCG AGGCCCAGGT CGCCAAGGCG CGCGCCGAGG TCGAGGTGCA GCAGGCGCGC
ATGGAGCAGG TGCGCCTGCA GCTCGAGGCC GACTACGTCA AGCCGGCCGA GGCCAACCGC
CAGCAGCTCA TCGCCCAGGC GCGCGGTGAG TCGGCGACCA TCATCGAGCG CGGCAAGGCC
ACGGCCGAGG CGCTGCGCCG GGTGTCGGCG ACCTGGCGCG AGGCCGGCGA CAGCGCCCGG
CAGATCTTCG TGGCGCAGAA GCTCAACGCG CTCATCGGCA GCCTGATGAG CACGGTCGGC
GACATCTCGG TGCAGAAGGT CACCTTCATC GACGAGAGCC TGGCCAAGGG CGGCTCGAAC
TTCGCCGTCA ACGCCGCGGT CACGGCCGAG CAGCTCAAGC ACACCCTGGG CGTGGACGTG
CCCGCGCTGC TCGAGCGCGT CGGCGGCGGC AACGGCGCAG GGGCCACGCG CCGCACCCCG
GCGACCCCGC CGCCGAAGCC GGCCCAGCGA TAA
 
Protein sequence
MFPILFLIAL AAAIAIAILV WKNLEICAPN EVLIFSGKRT KYAGREIGYR LVQGGRGFRW 
PLIEIVDRLD LTNMIIDIRV QGAYSKGGIP LNVDAVANVK IASVEPSIGN AIERLLGKSR
DHIMTVARET LEGNLRGVLA TLTPEEVNQD REKFADSLLQ EADHDLSRLG LELDTLKIQN
VSDDRGYLDS LGRRQSAAVI MRSRIAEAEN KAHAAERSAA NLETQEIAKI VAEIEKARAD
AERRIVDAQT RKDAMVAEAR GQVEAQVAKA RAEVEVQQAR MEQVRLQLEA DYVKPAEANR
QQLIAQARGE SATIIERGKA TAEALRRVSA TWREAGDSAR QIFVAQKLNA LIGSLMSTVG
DISVQKVTFI DESLAKGGSN FAVNAAVTAE QLKHTLGVDV PALLERVGGG NGAGATRRTP
ATPPPKPAQR