| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0392 |
|---|
| Symbol | |
|---|
| ID | 8542772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 540015 |
|---|
| End bp | 541847 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646385189 |
|---|
| Product | Heat shock protein 70 |
|---|
| Protein accession | YP_003264926 |
|---|
| Protein GI | 262193717 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.27278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.286405 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG AGAAGGTCAT TGGCATCGAC TTGGGCACGA CCAACTCGTG CGTGGGTATC
GTAGAGGACG GCACGCCGGT CGTGGTTCCC AACCGCGGCG GTTACAAGAC CACCCCGTCG
ATGGTCGCCA TCGCCGAGAA CGGCAAACGC CTGGTCGGCC ACATCGCCAA GCGGCAGGCG
ATCACCAACG CCGAGAACAC GGTGTTTGCC GCCAAGCGGC TCATCGGACG CAAATGGGGC
GCCGCCGCGG TGCGCTCGTC CGTGGACACG ATGCCCTATC GCATCGTCGA GGGGCCGCAC
AACGACGTGC GCGTGGTGCT GCGCGGCCAG GTGCTGGCGG TGCCCGAGAT CTCGGCCTAC
GTGCTGCAGG AGATGCGCAA CATCGCCGAG GAGTATCTCG GCGAGGAGAT CACCAAAGCT
GTGGTCACGG TGCCCGCGTA CTTCAACGAC GGCCAGCGCC AGGCGACCAA AGACGCCGGC
CGCATCGCGG GCCTCGACGT CATCCGCATC ATCAACGAGC CCACGGCCGC GGCCCTGGCC
TACGGCTTCG GTCGCGACAT CGAACGCAAG GTCGCGGTCT ACGACCTCGG CGGCGGCACC
TTCGACATCT CGGTGCTCGA CATCGGCAAC GGCGTGTTCG ACGTCATCTC CACCGCCGGC
GACACCTTCC TCGGCGGTGA GGACTTCGAC CGGCGCATCC TCGATTGGCT CATCCAGGAC
TTCCAGCGCG CGCACCGCGT GGACCTGCGC AAGGACAAGA TGGCCCTGCA GCGGCTCAAG
GACGTCGCCG AGAAGGCCAA GTGCGAGCTG TCGAGCGTGC GCGAAACCGA GATCAACCTG
CCCTTCATCA TCTCCACCGG GCGCAACGAG GCCCTGCACC TGCAGGCCGC GCTCAGCCGC
GAGAAGCTCG AAGAGCTCAC CGGCGACCTG GTCGAGCGCA CCCTCGAGAT CTGCAAGCGC
ACGCTCGATG ACGCCGGCGT CAAGCGCGGC GAGGTCGAGG ACGTCATCCT GGTCGGCGGC
ATGACCCGCA TGCCCATGGT GCAGCAGGCG GTGGCCCGCT TCTTCGGCAT CGAACCGTCC
AAGAACGTGC ACCCCGACGA GGTCGTCGCC ATCGGCGCAG CGATTCAGGG CGCGGCCCTG
GTCGACGACG ACAGCGACAT CCTGCTGCTC GACGTCACGC CGCACTCGCT CGGCATCATG
GTCAAGGGCG GCTACTTCCA CAAACTCATC GAGCAGAACA CCACGGTGCC GACCTCGCAG
TCGCACAACT TCACCACGGT CAAAGACAAC CAGACCTCGG TGAAGATCCT GGTGCTGCAG
GGCGAGAGCG AGCGCGGCGA GGAGAACGAG CTGCTCGGCG AGTTCGTGCT CACCGGTCTG
CGGCGCGCGC CGCGCGGCGA GGTCGAGATC GAGATCGACT TCCACATCAG CGCCGACGGC
ATCGTCAGCG TGACCGCGCG CGACCTCGAG ACCGGCATCG AACAGTCGAT CACGGTCACG
GCCACCAGCG GACTCACCGA AGGCGAGATC CAGAACCTGG TCGACTCCAA CAAAGACTAC
ATGGTGCAGG AACGCACCGA CCTCGAGTTC GAGAAACACC ACCACACCGC CGAGCGCCTG
CTCGACGAGA TCGAAGAGCT GTTTCCCGAG GTCACCACCA TCATCAGCGG CTCGGATTTC
GGACAGGACG CGGTCAAGAA GGCACGCGGC GTGTGCGAGC GGGCCAGAAA GGCCATCGCC
GCGCGTGACG GCGCACAGCT CAGAGAGACC AACGAAGCGC TCAATCGCAC CTTGAACATG
TTCAAAGGCG TGGTTTCCAA AACCCGCTCC TGA
|
|---|
| Protein sequence | MAREKVIGID LGTTNSCVGI VEDGTPVVVP NRGGYKTTPS MVAIAENGKR LVGHIAKRQA
ITNAENTVFA AKRLIGRKWG AAAVRSSVDT MPYRIVEGPH NDVRVVLRGQ VLAVPEISAY
VLQEMRNIAE EYLGEEITKA VVTVPAYFND GQRQATKDAG RIAGLDVIRI INEPTAAALA
YGFGRDIERK VAVYDLGGGT FDISVLDIGN GVFDVISTAG DTFLGGEDFD RRILDWLIQD
FQRAHRVDLR KDKMALQRLK DVAEKAKCEL SSVRETEINL PFIISTGRNE ALHLQAALSR
EKLEELTGDL VERTLEICKR TLDDAGVKRG EVEDVILVGG MTRMPMVQQA VARFFGIEPS
KNVHPDEVVA IGAAIQGAAL VDDDSDILLL DVTPHSLGIM VKGGYFHKLI EQNTTVPTSQ
SHNFTTVKDN QTSVKILVLQ GESERGEENE LLGEFVLTGL RRAPRGEVEI EIDFHISADG
IVSVTARDLE TGIEQSITVT ATSGLTEGEI QNLVDSNKDY MVQERTDLEF EKHHHTAERL
LDEIEELFPE VTTIISGSDF GQDAVKKARG VCERARKAIA ARDGAQLRET NEALNRTLNM
FKGVVSKTRS
|
|---|
| |