Gene Hoch_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0388 
Symbol 
ID8542768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp535467 
End bp536147 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID646385185 
ProductMethyltransferase type 11 
Protein accessionYP_003264922 
Protein GI262193713 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0410842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGTT TTCGCACTAC AGATCAACTC GTGCGCGTTC GAGACGTGTT TGACGAGTGG 
GCCGAGAGCG GCCGCGCGGA CGGTATGGAG CGCGGTCACG GGCCCACTGC CAAGCAGGCC
TTCGACGCGC TCGGTGTCTC TCCCAACTAC CGCTTTCTCG ATATCGGCTG CGGCAACGGC
TACGTGGTGC GCTGGGCGGC GCAGACCGCG CCCTCGGTAG ATGCCGTCGG GATCGACGTG
TCGGCGCACA TGGTCGCGCT GGCCCGGCAG CTCACCACCG GGCAGCCCAA CGCGCGCTAC
CGCCGCGGTA GCTTTCCCCA GATCGACCTC AGTCGCGCCC AGTTCGACGC CATCTTCTCG
ATGGAGGTTT TCTACTACCT GTCCGATCTC GACGCCGGCC TGCAGGCGGT CCGCGATCTG
CTGGCGCCGG GCGGTAGCTT CGCCTGCGTG GTCGACTTCT ATCGCGAGAA CGCCGACAGT
CACTCTTGGC CCGAGGATCT CGGCGTCGAC ATGCATCTCT TGTCGGCCGC CGAGTGGTGC
CAGGCCTTCG AGCGCGCCGG GCTCGAGGTC GCCGACCAGC GCCGTCTGTA TGCGCCCAAG
CTGCCGGGTA TGCCGGCGAG CTGGAAGCAC ACCACCGGCA GTCTGTTCAC GCTGGGTCGC
CGGCCGTCCG CATCGCGTTG A
 
Protein sequence
MRRFRTTDQL VRVRDVFDEW AESGRADGME RGHGPTAKQA FDALGVSPNY RFLDIGCGNG 
YVVRWAAQTA PSVDAVGIDV SAHMVALARQ LTTGQPNARY RRGSFPQIDL SRAQFDAIFS
MEVFYYLSDL DAGLQAVRDL LAPGGSFACV VDFYRENADS HSWPEDLGVD MHLLSAAEWC
QAFERAGLEV ADQRRLYAPK LPGMPASWKH TTGSLFTLGR RPSASR