Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0387 |
Symbol | |
ID | 8542767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 534762 |
End bp | 535400 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 646385184 |
Product | Peroxidase |
Protein accession | YP_003264921 |
Protein GI | 262193712 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0412974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTAC GAATCGGCAG CACTGCCCCC GACTTCACCC AGGAATCCAC CGCAGGGACC ATTTCGTTTC ACGAATGGTT GGGCGATAGC TGGGGGGTTT TGTTTTCCCA CCCGAAGGAT TTCACCCCCG TGTGCACCAC GGAGCTGGGG CGGGCTTCCT CGCTGGTCGA GGATTTCGCC AAGCGCAACT GCAAGCTGCT GGCGCTGAGC GTGGACTCGG TCGAGGACCA CAACAAGTGG ATCGGCGATA TCGAGGAGAC GCAGCAGGTC AAGCAGTCGT TCCCCATCCT GGGCGACACC GACCGCAAGG TCTCGCAGCT CTACGACATG ATCCACCCCG AGGCCAACGA CACGCTCACC GTGCGCTCGG TGTTCTTCGT CGATCCCAAG AAAAAGATCC GCGCGATCAT CACCTATCCG GCCAGCACCG GGCGCAACTT CCAGGAGATC CTGCGCGTCA TCGACTCGCT GCAGCTCACC GACCACCATC AGGTGGCGAC GCCGGCCGAT TGGAAGGACG GCGACGATGT GGTCATCGTG CCCTCGATCA CCGATCCCAA GGAGATCGCG GACAAGTTCC CCAAGGGCCA CAAGGAACTC AAGCCCTACC TGCGCATGAC GCCGCAGCCC AACAAGTAG
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Protein sequence | MSLRIGSTAP DFTQESTAGT ISFHEWLGDS WGVLFSHPKD FTPVCTTELG RASSLVEDFA KRNCKLLALS VDSVEDHNKW IGDIEETQQV KQSFPILGDT DRKVSQLYDM IHPEANDTLT VRSVFFVDPK KKIRAIITYP ASTGRNFQEI LRVIDSLQLT DHHQVATPAD WKDGDDVVIV PSITDPKEIA DKFPKGHKEL KPYLRMTPQP NK
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