| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0376 |
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| Symbol | |
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| ID | 8542756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 521581 |
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| End bp | 523773 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646385173 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003264910 |
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| Protein GI | 262193701 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.15183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGCGC GCGCGCTGCT GGCGCTGCTG CTGGCGTCCA GCGCACGCGC GGCGTGGGCC
GAGAGCGGCG CCCCGAGCCC CGGCAGCGCC GCCGCGGGCA CGCCGGCCGC GCGTCTGGGC
GAGGCCTGGC GCGCGTTCGA GACCCAGTCC TTTGCCCGCG CCTACGAGCT GGCCGCCGGC
ATCGAGCGCC AGGCGCTGAT CCACGACGAC TACGTGCGCT ATGTGCTGGC GCAGAGCTCG
TTCTTCCTCG GCCGTCCCGA CGAGGCGCTC GGCCACTTCC GCGCCCTGGC CGGGGCCGCC
GGGTCGCGCT TCCGCGAGCT GGCGCGCTGG CGCGTGGCCG ACTGCCTGTG GGCCCTGGGC
CGCACGCGCC CGGCCAGCAG CGCCTACGCC AAGCTGGTCG CGGCCGCGGC CAAGCAGCGC
TCGCCCGACG GCGACATCGG CCTGGCCCGC TACCGCATCG CGGCCGCCCT GGTCGCCCAG
AAGCGCAAAC AGCCGGCCAT GCGCGCGCTG CGCGAGTTTC TGCGCGAGCA CCCCGAGCAC
CCCATGGCCG AGCAGGCCAC CGCCGACCTG CGCGCGCTCG GCGGCGCCGC GGCCGTGAGC
CTGAGCCCGC GCGACCGCCT GGCGCGCGCG CAGACGCTCA CCGCCGAGCG CCGCTTGCAC
CAGTCCTACG CCGAGCTGGC CGCCATCGGC GACGAGGTCG ACGCCGAGCT GCGGCGCGAG
CGCGACTACT GGCAGGCCAT GACCCTGTTC AAGATGCGCC GCCGCTACGA GGACGCCGGC
CGCACCCTGC TGTCGCTGTA CAAGCAGCTC GGCGGTCGCG CGGCCATGGC CATGTTCCAC
GGCGCGCGCG CCCTGTCGCG CGCCGACCGC GACCGCGAGG CCATCGACTG GTATCAGCGC
GTGGCCGCCG AGTATCCGCG CACGATCTGG GCCGCCGAGG CGCAGTTTCT CGCCGGCTGG
CTGGCCTTCA ACCTCGGCGA CTACGACGCC GCCATCCCGC TGCTCGAGCG CACGCTCGAC
CGCTACGGCG ACACCAAGTG GCAAAAACCC GCGCACTGGT TCCTCGGCTT CTCGCACTTC
CTCAGCGGCA ACCCCGAACG CGCGCTGCCG CACTTCGAGC GCCTGGCGCG GCAGCGCGAC
AAGCTCGAGG GCGGCCAGGG CCGCTACTGG CACGCGCGCG CCCTGCAGGA ACTCGGACGC
GTGGACGAAG CCAACCGCAG CTACCGCGAG CTGGTCGCCG AGCATCCCTT CTCGTGGTAC
GCGCTGCTGT CGCGCGCGCG CCTCGGTGCC CACGGCGACC CCGCCGTGCA GGTCGATCCC
TTTGGCCGTC CTCTCGGACA GCGGGACGAC GACAGCCGCG CGGCCGCGCG CGTGCCCGCG
CTCGACACCC AGCCCAGCGC GGCCTTTGAG CGCGACGCCC TGATCCGGGC CGGCGACGAG
CTGCTCGCGG CCGGGCTGCC GATCGAAGCC GGCGTCGAGC TGCGGCGCGG CGAGTACGCG
TATCTCAAGC GCCACCGGGG CGACAAAGCC GCGGCCATGG CCGTGCTGCT CGAGCGCTAC
CGGCGCGCCC GCAACTTCAA CCGGCCGTGG ATGCTGGCCG TGGTGCACGG CGGCTGGCGC
GCGCTCAACA GCCCGCCCGT GGGCCGCGCG CGCACCTGGT GGGAGCACGC CTATCCGCGC
GCCTATCGCG ACCTGGTCGA GCGCTGGCAC GAGAGCGGCG GCGCCCCGGC CAACTATCTG
TACGCGATCA TGCGCAAAGA GAGCGGCTTC GACCCGCACC TGGTGTCCTA CGCCGACGCC
CGCGGGCTGA TGCAGATGAT CCCGCCGACC ACGCGCAAGG TCGCCGCCGC GCTCGAGCTC
GACTACACCG AGGACATGCT CTACGACCCC GCGCTCAACG TCCGCGTGGG CGCCTGGTAC
ATCGGCCGCC TGTTCCGCAA ATTCAAGCAG CAGGTGCCGA TCGCGGCTGG CTCGTACAAC
GCCGGCCCGC GCGCCGCCAT GCGCTGGCTG CGCCGCAACG GCCAGCGGCC CATGGACGAA
TACGTCGAGC TGATCTCGTA CAAGCAGACG CGCGGCTACA TGAAGAAGGT CCCCGAGACC
TATGCGCGCT ATCTTTACCT CTACGAAGGC GTGGTCTACG AGCAGCCGCT GGTGGTCGAC
GCCGAGTACA TCGACAACGA TCTGACCTAC TGA
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| Protein sequence | MLARALLALL LASSARAAWA ESGAPSPGSA AAGTPAARLG EAWRAFETQS FARAYELAAG
IERQALIHDD YVRYVLAQSS FFLGRPDEAL GHFRALAGAA GSRFRELARW RVADCLWALG
RTRPASSAYA KLVAAAAKQR SPDGDIGLAR YRIAAALVAQ KRKQPAMRAL REFLREHPEH
PMAEQATADL RALGGAAAVS LSPRDRLARA QTLTAERRLH QSYAELAAIG DEVDAELRRE
RDYWQAMTLF KMRRRYEDAG RTLLSLYKQL GGRAAMAMFH GARALSRADR DREAIDWYQR
VAAEYPRTIW AAEAQFLAGW LAFNLGDYDA AIPLLERTLD RYGDTKWQKP AHWFLGFSHF
LSGNPERALP HFERLARQRD KLEGGQGRYW HARALQELGR VDEANRSYRE LVAEHPFSWY
ALLSRARLGA HGDPAVQVDP FGRPLGQRDD DSRAAARVPA LDTQPSAAFE RDALIRAGDE
LLAAGLPIEA GVELRRGEYA YLKRHRGDKA AAMAVLLERY RRARNFNRPW MLAVVHGGWR
ALNSPPVGRA RTWWEHAYPR AYRDLVERWH ESGGAPANYL YAIMRKESGF DPHLVSYADA
RGLMQMIPPT TRKVAAALEL DYTEDMLYDP ALNVRVGAWY IGRLFRKFKQ QVPIAAGSYN
AGPRAAMRWL RRNGQRPMDE YVELISYKQT RGYMKKVPET YARYLYLYEG VVYEQPLVVD
AEYIDNDLTY
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