Gene Hoch_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0365 
Symbol 
ID8542745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp505943 
End bp506881 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content75% 
IMG OID646385162 
ProductGlutamate--tRNA ligase 
Protein accessionYP_003264899 
Protein GI262193690 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACT GCTCACGCTT TGCGCCCTCG ACCACGGGCC AGGCGCACCC GGGGACGCTG 
CTGGCCGCGC TGCTGTGCTG GCTCGACGCG CGCGCGCGCG GCGCCCGCCT GCTTTTGCGG
CTCGAGGACG TGGACCACAC CCGCTCGCGG CCCGAGCTGT CGCAGGCCAT GGGCGCGTCG
CTGGCCTGGT TCGGCCTCGA CTGGGACGAG GTCCACGAGC AGAGCGCGCA CCGCCAGCGT
CACGAGCAGG CGCTCGACGC CCTGGCCGCG CAAGGGCGGC TGTATCCCTG CCGCTGTAGC
CGCGCGGATC GTCGCCGCAG CGGCCGGCGT GCGCCCGACG GCGGCTTTGC CTACGATAAC
GCGTGTCGCG AGCGGCCGCT GCCCGCGGGC GGCTGGCGGG CCAGCGGCGA CAATCTGCGC
GCGCGCCTCG ACGACGAGGC CATCGCCTTG CGCGACGAGA GCGGGTTCGA TCTATCGCAG
CGTCCGGCCC ACGATATGGG CGATCCCGTG GTGTTGCGCC GCGACGGCGC CATCGCCTAT
CACCTCGCGG TCGTGGTCGA CGACGCCGCC GCCGGGGTGA CGCGCGTGGT TCGCGGTCGC
GATCTCGCCG CCAGCACGGC CACGCAGGTG GCGTTGCAGC GGCTGCTCGG CGTGCCCACG
CCGCAGTACC GGCACCACAT GCTGCTGCTC GAGCCGCACG GCGGCAAGCT GGCCAAGTTC
CACGGCGCGG TCGGCGTCGA CGCTCTGGCC CCGCACTATT CCGCGCCCGC CCTGTGCGGT
GTGCTGGCGC ATGCGGCTGG TCTGCGGGCG TCGCCGGCGC CGTGCCGGCC GGCCGACCTG
GTGTCCGATT TCGACTGGGG CCGGGTGCGC GAGGACGACC GGGTCATGGC CTGGCGCGCG
CCCGCGCTGG TGCTCGATCC GCCGCTGCCG CCGGCGTGA
 
Protein sequence
MRDCSRFAPS TTGQAHPGTL LAALLCWLDA RARGARLLLR LEDVDHTRSR PELSQAMGAS 
LAWFGLDWDE VHEQSAHRQR HEQALDALAA QGRLYPCRCS RADRRRSGRR APDGGFAYDN
ACRERPLPAG GWRASGDNLR ARLDDEAIAL RDESGFDLSQ RPAHDMGDPV VLRRDGAIAY
HLAVVVDDAA AGVTRVVRGR DLAASTATQV ALQRLLGVPT PQYRHHMLLL EPHGGKLAKF
HGAVGVDALA PHYSAPALCG VLAHAAGLRA SPAPCRPADL VSDFDWGRVR EDDRVMAWRA
PALVLDPPLP PA