| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0344 |
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| Symbol | |
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| ID | 8542724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 482351 |
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| End bp | 483172 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385141 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003264878 |
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| Protein GI | 262193669 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.178357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA CCATGTTTCG ACTCGCCGAC AAGGTCGCCA TCGTCACCGG CGCCACCGGG
CTCCTGGGAC GCGAGCACTG CCACGCGCTG GCCTCGGCCG GCGCGCGCGT GGTGGTCGCC
GACCTCGACC AGGCGGCGTG CGCGAGCTTC GCCGGCGAGC TGCAAGCGGC GCACGGCACC
GAGAGCATCG GACAGTCGGT CGATATCACC GACCCCGATT CGGTGGCCGC GCTGTTGAAA
GCCACGCTCG GGGCCTTTGA CCGCGTCGAC GTGCTGGTCA ACAACGCCGC CATCGATGAC
AAGGCCGCGG CCGAGCGTAC CGACGCCGAG GCCACGGCCT TCGAGAACTA CCCGCTGTCG
GCGTGGAAGC GCATGATCGA CGTGAACGTG ACCGGCACCT TCCTGTGCTG CCAGGTCATC
GGCGCGCACA TGGCCGAGCG CGGCACGGGC TCGATCATCA ACGTGGCTTC GACTTACGGC
CTGGTGGCGC CCGACCAGAG CATGTACCGT CGCCCCGATG GCAGCCAGGC GTTCTTCAAG
TCGGCCGCGT ATCCGACCTC GAAGGGCGCG GTGTTGCAGC TCACCCGCTT CCTCGGCGCC
TACTGGGGCG GCAAGGTGCG GGTCAACGCG CTGTGCCCGG GCGGGGTCAT GACCGAGAAC
ACCGACCCGG CCTTTGCCGA GCGCTACGCG GCGCGCACGC CGGCCGGACG CATGGCCGAT
CGCGGCGACT ACCGCGGCGC GGTGGTGTTC CTGGCCAGCG ACGACGCCGC GTACATGACC
GGCAATCAGC TCGTGGTCGA CGGCGGGTGG ACATGCCTGT AA
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| Protein sequence | MSSTMFRLAD KVAIVTGATG LLGREHCHAL ASAGARVVVA DLDQAACASF AGELQAAHGT
ESIGQSVDIT DPDSVAALLK ATLGAFDRVD VLVNNAAIDD KAAAERTDAE ATAFENYPLS
AWKRMIDVNV TGTFLCCQVI GAHMAERGTG SIINVASTYG LVAPDQSMYR RPDGSQAFFK
SAAYPTSKGA VLQLTRFLGA YWGGKVRVNA LCPGGVMTEN TDPAFAERYA ARTPAGRMAD
RGDYRGAVVF LASDDAAYMT GNQLVVDGGW TCL
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