| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0328 |
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| Symbol | |
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| ID | 8542708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 465474 |
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| End bp | 466967 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646385125 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003264862 |
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| Protein GI | 262193653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.912648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTC AACAACTCGG TCTCTCCGAG CCGCTCGTGC GCGCCGTACA CGACGCCGGC
TACACCAACG CTACCCCCAT CCAAACCCAG GCCATCCCCC CCGCGCTCGA CGGCCGCGAC
CTGCTCGGTT GCGCCCAGAC CGGCACGGGC AAGACGGCGG CCTTCTCCCT GCCCATCCTC
CAGCGTCTGG CCGAAACCGG CGACGGCAAC GCCCGTCCGC GCCGCGGCGC GCGGCCCATT
CGCGCTCTCA TCGTCACCCC CACCCGCGAG CTCGCCGCCC AGATCGGCGA CAGCATGACC
ACCTACGGCC GGCACTTGCC GCTGCGCAAC ACCGTCATCT TCGGCGGCGT GAACCAGAAC
CGCCAGGTGG ACGCGCTCCG GCGCGGGATC GACATCCTGG TGGCCACGCC CGGCCGCCTG
CTCGACCTCA TGGACCAGGG CTACATCCAC CTGGATCGGC TCGAGGTGTT CGTGCTCGAC
GAGGCCGACC GCATGCTCGA CATGGGGTTC ATCCACGATA TCCGCAAGAT CGTCGCCGCG
GTGCCGAGCG AGCGCCAGAC GCTGCTGTTT TCGGCCACCA TGCCGGGCGA AATTCAGTCG
CTGGCCGCGG GTCTGTTGCA GGAGCCGGTC AAGGTGTCGG TGACGCCGGA GTCGACCGCG
GCCGAGACCG TGGAGCAGTG CGTGTACCTG GTGTCCCGCG AGGACAAGCA GTCGCTGCTC
ACCGAGCTGC TGCGCGATGA CCCCGAGATG GCCAAGGTGC TGGTGTTCTC GCGCACCAAG
CACGGCGCCG ACCGCGTCGC CAAGCGGCTG TCGAAGTCCA ACATCCCGGC CCAGGCGATC
CACGGCAACA AGTCGCAGAA CGCCCGTCTG CGGGCGCTCG AGAGCTTCAA GCGGGGCGAC
ACCCGGGTGC TGGTGGCCTC GGATATCGCC GCCCGCGGCC TCGATATCGA CGCGCTCTCG
CACGTGGTCA ACTTCGATCT GCCCAACGAG CCCGAGACCT ACGTGCACCG CATCGGGCGC
ACCGGTCGCG CCGGCTGCGA GGGCGTCGCG ATGTCGTTCT GCGCCGATGA GGAGCGCGGC
TACCTGCGCA GCATCGAACG CCTGATCGAC CAGCTCATCC CCGTGATCGA GGACCATCCC
TTCCCCGCCG GCTTCGACAA GCTGCCGGTT GAGCAGCCGC GGCCGCAGCG CGCCAATCAC
GGCGGACCTC CGGGGCGCAG CCGGCGCTCG GGCGGCGGTC GCCGCGGCCC CGGTGGCGGT
CCTGGCGCCG GCACCGGCAA CGGTCGCCGC GGCCCCGGTG GCGGCTCGCG TCCGCGCCGC
GGCGGCGGCG GCGGCGGTGG TGGCGGTGGT GGCGGCGGCG GCGGCGGCGG CGGCGGCGGC
GGCGAGTCGC CCTCGCGCTC GCGCCGCGGT TCCGGTAGCG GACGGCGCAG CGGCGACGCG
CGCCCGGCCG ACACCGGCGG ACGCTCGCGC TCGCGCACCC GCTCTCGCTC CTGA
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| Protein sequence | MPFQQLGLSE PLVRAVHDAG YTNATPIQTQ AIPPALDGRD LLGCAQTGTG KTAAFSLPIL
QRLAETGDGN ARPRRGARPI RALIVTPTRE LAAQIGDSMT TYGRHLPLRN TVIFGGVNQN
RQVDALRRGI DILVATPGRL LDLMDQGYIH LDRLEVFVLD EADRMLDMGF IHDIRKIVAA
VPSERQTLLF SATMPGEIQS LAAGLLQEPV KVSVTPESTA AETVEQCVYL VSREDKQSLL
TELLRDDPEM AKVLVFSRTK HGADRVAKRL SKSNIPAQAI HGNKSQNARL RALESFKRGD
TRVLVASDIA ARGLDIDALS HVVNFDLPNE PETYVHRIGR TGRAGCEGVA MSFCADEERG
YLRSIERLID QLIPVIEDHP FPAGFDKLPV EQPRPQRANH GGPPGRSRRS GGGRRGPGGG
PGAGTGNGRR GPGGGSRPRR GGGGGGGGGG GGGGGGGGGG GESPSRSRRG SGSGRRSGDA
RPADTGGRSR SRTRSRS
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