| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0290 |
|---|
| Symbol | |
|---|
| ID | 8542669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 423395 |
|---|
| End bp | 424756 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646385086 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003264824 |
|---|
| Protein GI | 262193615 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.242267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGTTT GCCCTCGCTG CCGCGAGCGG TTTGCCAATC CAGAGCGCTT CTGTCCGACT
GACGGCAGCG TCCTCGTCGA GGACCTGGAT CTCGCTCGCA TCGGCACGGA GGTCGGCAAC
TATCACCTCC ACGAGATCCT CGGGCGCGGC GGTATGGGCA CGGTCTACCG CGCCGAGCAC
ATTTACATCA AGAAGCGCGT CGCCATCAAA GTGCTGCACG CGCAGTTCGC CAAGTACGAA
GAGGCGGTGG TGCGCTTTCT GCGCGAGGCC CAGGCGGCCT CGTCGATTCA GCACCCGAAC
ATCGTCGACG TCACCGATTT CGGCCACACG CCCGACGGCG GCGTGTTCTT CGTGATGGAG
TACCTCGAGG GCACCAGCCT CGAGGACAAG ATCGAAAAGA ACGGCTTCAT CGAGCTGCAC
CGGGCGCTCA ACATCGCCAA CCAGATGTCG CTGGCGCTGG CGGCCGCGCA CGAGAAGCAC
ATCGTGCACC GCGACCTCAA GCCCGACAAC GTGATGCTCA TCCGCAAGCC CGGGCGTCGC
AACATCTTCC GCGCCTACAC CGACGACGAG GGCGACACGC GCATCGTCAC CGAGCGCGAG
AACCAGTTCG ACTTCGTCAA GATCCTCGAC TTCGGCATCG CCAAGGTGCT GACCGTCGAT
GAGGGCGACA CCCTGCAGGG CGCGATCTTC GGCACGCCCG AGTACATGTC GCCCGAGGCC
GCGCGCGGCG CCGAGGTCGA TCTGCGCTCG GACATCTACT CGGTGGGCGT GATCCTCTTC
GACATGCTGT GCGGGCGGCC GCCCTTCGAG GCCGACGAGG TCCAGGACGT GCTCGCGATG
CACATCTCGC AGCGTCCGCC TTCGCCCCGC GTGATCGCGC CCGAGCGCGA GATCACCGAG
GCCTGCGAAC ACCTGGTGCT GCGCGCGTTG GCCAAGGATC CCTTCGAGCG CCATCAGTCG
ATGGACGAGT TTCGCGAGGA GCTGCAGCAC TGCTACGGCA GCGTCGCCTA CCGCCGCAAC
GCGCGCTCGA TCCCGGGCGC CGCGACCCTC GGTCCCGAGG GCCGCGGGCG GCGGCTCACC
GACGAGCTCG ACGAGTGGAT TCACACCGAG CCGCGGCTCT CGGCCGAGCG CGTCCACCGG
CTCACCTACG GCGGCGACGA CGACGAGAGC ACCACGGTCG AGTCGAGCAT GCCGATGATG
TCGCCGCGCG ACACCCTGCA GGACATCCAG CCGCCCGCGG TCGCCATGGA GCCGCAGACC
GAGCCCAACC TGGCCCGCAG CGCGCTGCTC ACGCCCGAAG AAGAAGACCG CCTGGCGGCC
GCGGTGGACG CCGCCCTCGA CGACGAGCTC GAGGATTTCT AG
|
|---|
| Protein sequence | MPVCPRCRER FANPERFCPT DGSVLVEDLD LARIGTEVGN YHLHEILGRG GMGTVYRAEH
IYIKKRVAIK VLHAQFAKYE EAVVRFLREA QAASSIQHPN IVDVTDFGHT PDGGVFFVME
YLEGTSLEDK IEKNGFIELH RALNIANQMS LALAAAHEKH IVHRDLKPDN VMLIRKPGRR
NIFRAYTDDE GDTRIVTERE NQFDFVKILD FGIAKVLTVD EGDTLQGAIF GTPEYMSPEA
ARGAEVDLRS DIYSVGVILF DMLCGRPPFE ADEVQDVLAM HISQRPPSPR VIAPEREITE
ACEHLVLRAL AKDPFERHQS MDEFREELQH CYGSVAYRRN ARSIPGAATL GPEGRGRRLT
DELDEWIHTE PRLSAERVHR LTYGGDDDES TTVESSMPMM SPRDTLQDIQ PPAVAMEPQT
EPNLARSALL TPEEEDRLAA AVDAALDDEL EDF
|
|---|
| |