| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0287 |
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| Symbol | |
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| ID | 8542666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 420102 |
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| End bp | 421148 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385083 |
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| Product | Isocitrate dehydrogenase (NAD(+)) |
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| Protein accession | YP_003264821 |
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| Protein GI | 262193612 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.48991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAGC AGGAACCAGT CGAGTTTTCC AAGTGCCCCA AAGTCTCGCT GATCAAAGGT
GACGGCATCG GCCCCGAGAT CGCCGAGGCG TGCGTCCAGA TCATCGAAGC GGCGGGCGGC
ACCATCGAGT GGGAGCCGGT CGCCGCCGGC CTCACCGCCA TCGAGGCCGA CCACGATCCC
CTGCCGCAGG CGACCATCGA CTCGATCGCG GCCAACCGCG TGGCCCTCAA GGGGCCGCTG
GCGACGCCGG TCGGCGGCGG CTTCCGCTCG GTCAACGTGG CCCTGCGCCA GCACTTCGAT
CTGTTCGCCA ACGTGCGCCC GGCGATCAGC CTCGCGGGCG TGCCCACGCG CTTCGAGAAC
GTCGACATCG TGCTGGTGCG CGAGAACACG GAGGACCTGT ACGCGGGCGT CGAGCACTAC
ATCGACCCGC GTCGCTCCGC GGCCGAGTCG ATCGCCATCA TCACGCAGTT CGGCTCCGAG
CGCGTCATCC GCTACGCCTT CGAGTACGCG CGCCGCCACG GCCGCAAACA GGTCACCGCG
GTGCACAAGG CCAACATCCT CAAGATGTCC AACGGCCTGT TCCTCGACGT CGGCCGCGAG
GTCGCCAAGG AGTACGAGGA CATCAGCTTC GACGACATGA TCGTCGACGC CACCGCCATG
CGCCTGGTGG TCAACCCCGA GAACTTCGAC GTCATCGTCA CCATGAACCT GTTCGGCGAC
ATCCTCAGCG ACCTCACCGC CGGCCTGGTC GGCGGGCTGG GCGTGGCGCC GGCGGCCAAC
ATCGGCTCGG GCGGCTGCGC CATCTTCGAG GCCGTGCACG GCACCGCGCC CGACATCGCC
GGGCAGGGCA TCGCCAATCC CACCGGTCTG CTGCGCTCGG CCGTGCTGAT GCTCGAGCAC
ATCGGCCAGG GCGATGTCGC CGAGCGCGTC AACCGCGGCG TGATGCAGGC GCTGGCCGAC
GCCTCCTCGC GCACCCGCGA CCTCGGCGGC GAGGCCGACA CGGCCGCGTT CACCAAGGCC
GTGATCGCCA ACCTCGAAGG CAGCTGA
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| Protein sequence | MSEQEPVEFS KCPKVSLIKG DGIGPEIAEA CVQIIEAAGG TIEWEPVAAG LTAIEADHDP
LPQATIDSIA ANRVALKGPL ATPVGGGFRS VNVALRQHFD LFANVRPAIS LAGVPTRFEN
VDIVLVRENT EDLYAGVEHY IDPRRSAAES IAIITQFGSE RVIRYAFEYA RRHGRKQVTA
VHKANILKMS NGLFLDVGRE VAKEYEDISF DDMIVDATAM RLVVNPENFD VIVTMNLFGD
ILSDLTAGLV GGLGVAPAAN IGSGGCAIFE AVHGTAPDIA GQGIANPTGL LRSAVLMLEH
IGQGDVAERV NRGVMQALAD ASSRTRDLGG EADTAAFTKA VIANLEGS
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