| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0261 |
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| Symbol | |
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| ID | 8542640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 386971 |
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| End bp | 388431 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385057 |
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| Product | Integrin alpha beta-propellor repeat protein |
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| Protein accession | YP_003264795 |
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| Protein GI | 262193586 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.721342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.813855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACCC TCTTCGACTG CGCGGACGCT GGTCGCGCCC CCGGTGCATC TCAATCGCGA
AACCACTCCA CCCCTTCGCA GCGGCGAGCG GGGCCACCGC GTGCGCTGGC GCAACTCGGT
GGCGCGCTGG CCTGTTTTGC CCTGCTGGGC TGCGGCGGCT CGAACGGCAC GCCCGATCTC
GACGGCGGCG ACGGCCCCGA TCCGCAGGTA GACGCCGGCG TCGACGCCGA GCCCATGCCG
CAGCCCGACG CCGGACCGCC CGCGGGCTTC GACTTCCCCG ACTTCCTCGG CGCCGCCAGC
GGCGCGTCGC GCAACTGGTT CGGCTTCTCC GTGGACGCCG ATGACGGCGT CATCGTGGTC
GGCGCCCCGT TCTACGATCA CTTCGAAGAC GGCGAGGTCG TCGGTCCCTC GGTGGGCGCG
GCCTACGTGT TCGAGCAAGT CGGCGACATG TGGCTGCAGA CCGGCCACAT CCTGCCGCCC
GACCCCAGCG AGGACGAGTA CACCAGCAGC ATGTTCGGCT GGTCGGTGGC CGTCGAAGGC
GATCTCATCG CGGTCGGCGC GTGGAACGAG GACACCGGCG CGCAGAACGG CGCCGTCTAC
CTCTACCAGC GCGGCGGCGG TACCTGGGTG TTCCACGATC GGCTGGTGCC CGACGCTGGC
GATGACCAGT CGCAGTTCGG CTACGCGCTC GACATCCACA GCGGCCGCGT CGCGGTCGGC
GCGCCCATCG TCACCGACGT GGACGACAAC GACCCAGCCA CCTTCGCCTA CATCTTCGAA
CGCCAGGGCC AGAGCTGGCA GGCCACCAAG CTGCTGCCCG ATGAGATTCC CTTCGACGCC
TGGTACGGCT ACTCGGTGAG CTTGACCGAG GACATGCTGG TCGTCGGCGC CCCGGGCGAC
AAGATCCGCG GCGACGGCGC CGGCACCGTG TACGTCTTCG GTCTGGTCAA CAACACCTGG
CAGCAGATCG CCCAGCTCGA CAGCCTCTTC AACGAGGCCC GCGACCACTT TGGTCGCTCG
GTCGCAGCCG AGGGCGACGT GATCGTCATC GGCGCTGACG GCGGCGGCGA CCCCACGACC
TTGAACACCG GCGCGATCTC GATCTTCGTG CGCGAGCAGG GGACCTTTGG CGAGGAGACG
CTCATCATCC CCGACGACTT CAGCGTCGGT CAGGGCTTTG GCGCCTCGGT GGCCATGCGC
GACGGCGTCA TCATCGTCGG CGCGCACCGC GACGACGAGC GCGGCGTTGA CGCCGGCGCC
GCCTACATCT ACATGCAAGA GAGCGACGGA ACCTGGATCC AGTACTCGAA GCTCTACAAT
CCCGCTGGCC GCAGCGGCGA TCAGTTTGGC GCGGCGGTCG CGATCAGCGA TACCCGGGCC
ATCGTTGGCG CGCGTTACGA CGATGATGAC GGCGCCGACT CCGGCAGCGC GTACATCTTC
GAAAAGGCGC CGTCCCCTTG A
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| Protein sequence | MVTLFDCADA GRAPGASQSR NHSTPSQRRA GPPRALAQLG GALACFALLG CGGSNGTPDL
DGGDGPDPQV DAGVDAEPMP QPDAGPPAGF DFPDFLGAAS GASRNWFGFS VDADDGVIVV
GAPFYDHFED GEVVGPSVGA AYVFEQVGDM WLQTGHILPP DPSEDEYTSS MFGWSVAVEG
DLIAVGAWNE DTGAQNGAVY LYQRGGGTWV FHDRLVPDAG DDQSQFGYAL DIHSGRVAVG
APIVTDVDDN DPATFAYIFE RQGQSWQATK LLPDEIPFDA WYGYSVSLTE DMLVVGAPGD
KIRGDGAGTV YVFGLVNNTW QQIAQLDSLF NEARDHFGRS VAAEGDVIVI GADGGGDPTT
LNTGAISIFV REQGTFGEET LIIPDDFSVG QGFGASVAMR DGVIIVGAHR DDERGVDAGA
AYIYMQESDG TWIQYSKLYN PAGRSGDQFG AAVAISDTRA IVGARYDDDD GADSGSAYIF
EKAPSP
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