| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0260 |
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| Symbol | |
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| ID | 8542639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 385377 |
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| End bp | 386756 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646385056 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_003264794 |
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| Protein GI | 262193585 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.755813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAA ACTCGACCCC CTCCGCAGCG GCCTGGAGCC CGACTTCTTG GCAGGAAAAG
ACTGCCACCC AACAAGCCAC CTACCCCGAC CAGGAAGCGC TCGACCGCGT GGTCGCCCAG
ATCGCGCGCT TGCCGCCGCT GGTGACCTCG TGGGAGATCG AGGCGCTCAA AGAGAAGCTC
GGTCGCGCCG CCCGCGGTGA GGCCTTCTTG CTGCAAGGCG GCGACTGCGC CGAATCCTTC
GACAACTGCG ACTCGCAGAC CATCGCCGGT AAACTCAAGG TCCTGCTGCA GATGAGCCTG
GTGCTCACGC ACGGGATCCG GCGCCCCATC ATCCGCGTGG GCCGCATCGC CGGGCAGTAC
GCCAAGCCGC GCTCGGCCGA TACCGAGAGC CGCGGCGAGG TCACCCTGCC GAGCTACCGC
GGCGACCTCG TCAACCGCCT GGCCTTCACC GACGAAGATC GCACGCCCAA CCCCGATCTG
ATGCTGCGCG GCTACGAGCG CGCCGCGCTC ACGCTCAACT TCATCCGCGC GCTGGCCGAC
GGCGGCTTCG CCGACCTGCA CCACCCGGAA TACTGGGACC TGTCCTTCGC CCAGCACCAC
GACACCGAGG GTCACTACGA GCGCATCGTC GCCTCGATTC GCGACGCCAT CGCCTTCATG
GAGTCGGTGG GCGAGATGCG GCTCACCGGC CTGGGCCGCG TGGACTTCTA CACCAGCCAC
GAGGGCCTGA TGCTGCACTA CGAACAGGCC CAGACCCGGC GCGTCCCCCG CCGTGACGGC
TGGTACAACC TGTCGACGCA TATGCCCTGG ATCGGCATGC GCACGGCCAC CATGGATAGC
GCCCACATCG AGTACTTCCG CGGCATCCGC AACCCGGTGG CCGTGAAGCT GGGGCCCGCG
GTCACGCCGG AGTGGATCAC CCAGCTCCTC GACGTGCTGC ATCCCGACGA CGAGCCCGGC
CGGCTCACCT TCATCCATCG CCTGGGCGCT GAGAAGGTCT CCGACCTCCT GCCCAGAATG
ATCGATACCG TCCAGCGCAG CGGCAAGACC GTGCTGTGGA CCGTGGACCC CATGCACGGG
AACACCGAGT CCACCGAGCG CGGCGTCAAG ACCCGCCACT TCGACAAGAT CCTGGCCGAG
GTCGAAGCCT CGTTCGAGAT CCACGAGAGC ATGGGCAGCA CGCTCGGCGG CGTCCACCTC
GAGCTCACCG GCGACAACGT CACCGAGTGC GTGGGTGGCG CCCGCGGTCT CAGCGAGGCC
GACCTCGAAC GCGCCTACCG CAGCACCGTG GACCCGCGCC TCAACGCCGA GCAAGCGCTC
GAGCTGGCGC TGCGCGTGAC CCAACACCTT CATACATCGA ACCAATCGTC CCGCCGCTGA
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| Protein sequence | MKPNSTPSAA AWSPTSWQEK TATQQATYPD QEALDRVVAQ IARLPPLVTS WEIEALKEKL
GRAARGEAFL LQGGDCAESF DNCDSQTIAG KLKVLLQMSL VLTHGIRRPI IRVGRIAGQY
AKPRSADTES RGEVTLPSYR GDLVNRLAFT DEDRTPNPDL MLRGYERAAL TLNFIRALAD
GGFADLHHPE YWDLSFAQHH DTEGHYERIV ASIRDAIAFM ESVGEMRLTG LGRVDFYTSH
EGLMLHYEQA QTRRVPRRDG WYNLSTHMPW IGMRTATMDS AHIEYFRGIR NPVAVKLGPA
VTPEWITQLL DVLHPDDEPG RLTFIHRLGA EKVSDLLPRM IDTVQRSGKT VLWTVDPMHG
NTESTERGVK TRHFDKILAE VEASFEIHES MGSTLGGVHL ELTGDNVTEC VGGARGLSEA
DLERAYRSTV DPRLNAEQAL ELALRVTQHL HTSNQSSRR
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